Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq4 95.1 8e-15 >seq1 Length=3319996 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| ||||| || ||||||||||||||||| || || || Sbjct 2719256 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACGATCACTCTCGAAGTCGAGTCTTCG 2719197 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || ||| || ||||| || || | || || || || Sbjct 2719196 GACACGATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAG 2719137 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||||||||| ||||| || |||| ||||| | |||||||||| Sbjct 2719136 CAGCGCCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGATTACAAC 2719077 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 2719076 ATCCAGAAGGAGTCTAC 2719060 >seq4 Length=1918071 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || || || || || || ||||| || || || || || | Sbjct 1158418 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAGACCATCACCCTTGAGGTAGAGTCGTCC 1158359 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || |||| |||| | | ||||| || ||| | || || ||||| Sbjct 1158358 GACACCATCGACAACGTTAAGGCAAAGA-TCCAAGACAAGGAGGGTATCCCTCCCGATCA 1158300 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || |||||||| || || ||||||| | ||||| || ||| ||||| Sbjct 1158299 ACAGCGTCTCATCTTTGCCGGAAAGCAGTTGGAAGATGGGCGCACGTTGTCCGACTACAA 1158240 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| || | ||| | ||| Sbjct 1158239 CATCCAGAAGGAGTCGACTCTCCATCTTGTT 1158209 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || || | |||||||| |||||||| || || || || || | Sbjct 1158191 AATGCAGATCTTCGTCAAGACGTTGACGGGAAAGACGATCACCCTTGAGGTCGAATCGTC 1158132 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | |||| || ||| ||||| ||||| | || || ||||| Sbjct 1158131 CGACACGATCGACAACGTAAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCGGATCA 1158072 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || || || || || || || |||| ||||| | |||||||| Sbjct 1158071 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGTCGGATTACAA 1158012 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 1158011 CATCCAGAAGGAGTCAAC 1157994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007507298064