Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 >seq5 Length=1807594 Score = 150 bits (166), Expect = 2e-31 Identities = 267/389 (69%), Gaps = 3/389 (1%) Strand=Plus/Plus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 ||||| |||| ||| || | |||||| ||||| || || || ||||||| || ||||| Sbjct 1323262 CCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGGCCTGGCATTAAGCCGCGTTTC 1323321 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 || ||||| |||||||| ||||| || || || |||||||||||||| ||| |||||| Sbjct 1323322 TTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAATATGCCTTCGACGCACGCAAAC 1323381 Query 48282 GCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCA 48338 || || | ||| || | || | |||| ||||| || | |||||||| Sbjct 1323382 GCCACCAGGCGCTCGGCGAAGGAGGATCTTTTGTCAGAGATCCAGCGGAGGGCCCAATCT 1323441 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 || ||||| || | || |||| || || || ||||| || || || || | | Sbjct 1323442 GCTTTCTTTTTGATGCACGGCACGGTGTCGATGGCATTGAACAGGCGGTCCCGCTCTTGG 1323501 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 | ||||| | || ||||| || | || ||| |||| || || | |||||| || Sbjct 1323502 GTGTCTTTGATATATGTATCAATCAGGAGTGAGTACGTTTCCGAATGGACATTTTCCATC 1323561 Query 48459 GCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGT 48518 || || || ||||||||||| | ||||||| | || ||||| || | || ||| Sbjct 1323562 ATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGCGGCTTGAACCTCGTTAGAGAAGCGT 1323621 Query 48519 TCAGCCAAATTCTCATTTACTATTCCATC 48547 || | | |||||| || ||||| || || Sbjct 1323622 TCGACGAGATTCTCGTTGACTATCCCGTC 1323650 Score = 114 bits (126), Expect = 2e-20 Identities = 146/198 (74%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 48174 CTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAAT 48233 || || || ||||| || || |||||||| ||||| |||||||| || |||||||| || Sbjct 1325634 CTGATCAACTCGTTCGAGAAGGTGAGACCAGGCATGAGTCCACGCTTCTTGAGCCAGAAG 1325575 Query 48234 ATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTC 48293 || | |||||| || ||||| ||||| || || || ||||| || || ||| ||| | Sbjct 1325574 ATGGACGCGAAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAAGGCGACAAGACGT 1325515 Query 48294 TCTCCGTAACT--GGCTTC--GTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTT 48349 || || ||| | |||| || | |||||||| | ||||| |||||||||||||| Sbjct 1325514 TCAGCG-AACGAAGACTTCTTGTCGGAGATCCACCGGAGGGCCCAGTCAGCCTTCTTCTT 1325456 Query 48350 TACACAAGGCATTGTTTC 48367 | ||||| || || || Sbjct 1325455 GATGCAAGGGATGGTCTC 1325438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664388853120