Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5 129 8e-25 >seq5 Length=1807594 Score = 129 bits (142), Expect = 8e-25 Identities = 282/418 (67%), Gaps = 7/418 (2%) Strand=Plus/Plus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 ||||| |||| ||| || | |||||| ||||| || || || ||||||| || || || Sbjct 1323262 CCTTCGTCTCGACTGATCAGTTCGTTTGAAAAGGTCAGGCCTGGCATTAAGCCGCGTTTC 1323321 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 || ||||| ||||| || ||||| || || || |||||||||||||| || ||| || Sbjct 1323322 TTCAGCCAGAATATTGCGGCGAAGGACCCGGAGAAGAATATGCCTTCGACGCACGCAAAC 1323381 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCATCATT----ATGAATCCACCTTTGAGCCCAATC 46826 || || || | ||| || || | ||| || | ||||| | | |||||||| Sbjct 1323382 GCCACCAGGCGCTCGGCG-AAGGAGGATCTTTTGTCAGAGATCCAGCGGAGGGCCCAATC 1323440 Query 46827 AGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATC 46886 || || || || | || |||| || || || ||||| || || || || | Sbjct 1323441 TGCTTTCTTTTTGATGCACGGCACGGTGTCGATGGCATTGAACAGGCGGTCCCGCTCTTG 1323500 Query 46887 ACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAAT 46946 | ||||| | ||||||||| || | || ||| |||| ||||| | ||||| || Sbjct 1323501 GGTGTCTTTGATATATGTATCAATCAGGAGTGAGTACGTTTCCGAATGGACATTTTCCAT 1323560 Query 46947 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCG 47006 || || || ||||||||||| | ||||| | || ||||| || | || || Sbjct 1323561 CATGATTTGGAAGCCGTAAAAACAGCGGGCTTCTGCGGCTTGAACCTCGTTAGAGAAGCG 1323620 Query 47007 TTCAGAC-AAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATG 47063 ||| ||| | |||||| || ||||| || || || || || || |||| ||||| Sbjct 1323621 TTC-GACGAGATTCTCGTTGACTATCCCGTCGGAGGCGGCGAAGAAGGCCAGAACATG 1323677 Score = 114 bits (126), Expect = 2e-20 Identities = 155/211 (73%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 46650 GCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTT 46709 ||| || || | || || || ||||| || || ||||| |||||||| ||||||||||| Sbjct 1325647 GCCCTCGTCACGGCTGATCAACTCGTTCGAGAAGGTGAGACCAGGCATGAGTCCACGCTT 1325588 Query 46710 TTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAA 46769 |||||||| || || | |||||| || ||||| ||||| || || || || || ||||| Sbjct 1325587 CTTGAGCCAGAAGATGGACGCGAAGGAGCCAGAGAAGAAAATACCCTCGACGGCAGCGAA 1325528 Query 46770 TGCGACAAGTCTCTCTCCGTAAC--TGGCATCAT-TATGA-ATCCACCTTTGAGCCCAAT 46825 |||||||| | || || ||| | | || | | || ||||||| | ||||| | Sbjct 1325527 GGCGACAAGACGTTCAGCG-AACGAAGACTTCTTGTCGGAGATCCACCGGAGGGCCCAGT 1325469 Query 46826 CAGCCTTTTTCTTTACACAAGGCATTGTTTC 46856 ||||||| ||||| | ||||| || || || Sbjct 1325468 CAGCCTTCTTCTTGATGCAAGGGATGGTCTC 1325438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712929872866560