Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 136 9e-27 seq4 127 5e-24 >seq1 Length=3319996 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| |||||||||||||| || |||||||||||||||| | || | || || Sbjct 2719044 GAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCGTC 2719103 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||| |||||||| | ||||||||| | | || || ||||| || Sbjct 2719104 CTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 2719163 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || ||| || || | || | |||| ||| ||| ||||| ||||| || || Sbjct 2719164 CTGGATCTTTGCCTTCACGTTGTCGATCGTGTCCGAAGACTCGACTTCGAGAGTGATCGT 2719223 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || ||||| ||||||| |||||| Sbjct 2719224 CTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2719256 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 || || ||||| ||||| || ||||||||||| |||| | || | ||||| || || Sbjct 2718823 AGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGC 2718882 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 ||||| |||||||| || | |||||| |||| | ||| || ||||| ||||| || Sbjct 2718883 TGCTTCCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATC 2718942 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || || | || | | | || || ||| || ||||| || || || ||||| Sbjct 2718943 TTCGCCTTCACGTTGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCG 2719002 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| ||||||| |||||| Sbjct 2719003 GTAAGAGTCTTGACGAAGATCTGCAT 2719028 >seq4 Length=1918071 Score = 127 bits (140), Expect = 5e-24 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| |||||||| ||||| ||||| || ||||||||||| |||| || || | Sbjct 1158200 GAGACGGAGAACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGACAACGTGCG 1158259 Query 151946 CCCATCTTCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||||||| | ||||| ||||| ||||| || | ||| || || | | ||| || Sbjct 1158260 CCCATCTTCCAACTGCTTT--CCGGCAAAGATGAGACGCTGTTGATCGGGAGGGATACCC 1158317 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| || ||| || || | || | | |||| || |||||| ||||| Sbjct 1158318 TCCTTGTCTTGGATCTTTGCCTTAACGTTGTCGATGGTGTCGGACGACTCTACCTCAAGG 1158377 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| || || ||||| ||||||| ||||| Sbjct 1158378 GTGATGGTCTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 1158418 Score = 113 bits (124), Expect = 1e-19 Identities = 153/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || ||| ||| || || |||||||| |||| | || | |||||||| | Sbjct 1157705 CAAG-TGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCATCTTCGA 1157763 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| ||||||||||| || | ||||||||| | || ||| || ||||| || || Sbjct 1157764 GTTGCTTT--CCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTG 1157821 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || || | || | |||| ||| ||| || |||||||| ||||| || Sbjct 1157822 GATCTTCGCCTTCACGTTGTCAATCGTGTCGGAAGACTCGACCTCAAGAGTGATAGTCTT 1157881 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| ||||||| |||||| Sbjct 1157882 TCCGGTGAGGGTCTTGACGAAGATCTGCAT 1157911 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 ||||||| || || ||||| || |||||||||||||| | | || | || || || | Sbjct 1157983 CAAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCCGTCCTCGA 1158042 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || ||||||||||| | |||||| |||| | || |||||||| ||||||| Sbjct 1158043 GCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTTGTCTTGAA 1158102 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | |||| || || || ||||| || || || || | Sbjct 1158103 TCTTCGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGATCGTCTTTC 1158162 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 |||| | ||||| ||||||| ||||||| Sbjct 1158163 CCGTCAACGTCTTGACGAAGATCTGCATT 1158191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153813290068868