Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq4 149 2e-30 seq1 149 2e-30 >seq4 Length=1918071 Score = 149 bits (164), Expect = 2e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || ||||| ||||||||||| ||||| ||| || ||| Sbjct 1158187 CAGATCTTCGTCAAGACGTTGACGGGAAAGACGATCACCCTTGAGGTCGAATCGTCCGAC 1158128 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||| ||||| ||||| || || ||||| ||||| Sbjct 1158127 ACGATCGACAACGTAAAGGCGAAGATTCAAGACAAGGAAGGCATTCCCCCGGATCAGCAG 1158068 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || |||||||| || || | || || | ||||| ||| || Sbjct 1158067 CGTCTTATCTTCGCTGGTAAGCAGCTCGAGGACGGCCGCACCCTGTCGGATTACAACATC 1158008 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || ||||| || ||||||| Sbjct 1158007 CAGAAGGAGTCAACCCTCCATCTTG 1157983 Score = 140 bits (154), Expect = 8e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || |||||||| ||||| || || ||| Sbjct 1158415 CAAATCTTCGTCAAGACGCTTACCGGCAAGACCATCACCCTTGAGGTAGAGTCGTCCGAC 1158356 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||| || ||||| || || |||||||| || || || Sbjct 1158355 ACCATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAGGGTATCCCTCCCGATCAACAG 1158296 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| |||||||| ||| | |||||||| | || | |||| || ||| || Sbjct 1158295 CGTCTCATCTTTGCCGGAAAGCAGTTGGAAGATGGGCGCACGTTGTCCGACTACAACATC 1158236 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || ||||||||| Sbjct 1158235 CAGAAGGAGTCGACTCTCCATCTTGTT 1158209 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| || ||||| || ||||| || || ||| Sbjct 1157908 CAGATCTTCGTCAAGACCCTCACCGGAAAGACTATCACTCTTGAGGTCGAGTCTTCCGAC 1157849 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || ||||| |||||||| || || ||||| || |||||||| Sbjct 1157848 ACGATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAGCAG 1157789 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| || |||||||||||| | || || |||| || ||| | Sbjct 1157788 CGCCTCATCTTCGCCGGAAAGCAACTCGAAGATGGACGCACGCTCTCCGACTACAACATT 1157729 Query 178104 CAAAAAGA 178111 || || || Sbjct 1157728 CAGAAGGA 1157721 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || | || || || || ||||| ||||| || || ||| ||| Sbjct 1158643 CAGATCTTTGTGAAGACCTTGACTGGCAAGACTATCACGCTCGAAGTCGAGTCCTCCGAC 1158584 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || || || ||||||||| Sbjct 1158583 ACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAA 1158524 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || |||||||| ||||| | || || | || || ||| | Sbjct 1158523 CGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCCTCTCTGACTACAACATT 1158464 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 1158463 CAGAAGGAGTCGACTCTTCACCTCGT 1158438 >seq1 Length=3319996 Score = 149 bits (164), Expect = 2e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||| | |||||||| || ||| Sbjct 2718747 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGTCTTCGGAC 2718688 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||||||||| || || || ||||| || |||||||| Sbjct 2718687 ACCATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGTATCCCACCCGACCAGCAG 2718628 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || |||||||| ||||| | ||||| |||| |||||| || Sbjct 2718627 CGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACTCTCTCCGACTATAACATC 2718568 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || |||||||||| Sbjct 2718567 CAGAAGGAGAGCACGCTGCATCTTG 2718543 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||| || ||||| || || || Sbjct 2719025 CAGATCTTCGTCAAGACTCTTACCGGCAAGACCATCACGCTTGAGGTCGAGTCGTCCGAT 2718966 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || ||||| || ||||| || || ||||||||||| ||||| Sbjct 2718965 ACCATCGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAG 2718906 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || |||| || ||| || Sbjct 2718905 CGCCTGATCTTCGCGGGGAAGCAGCTGGAGGATGGTCGTACACTCTCCGACTACAACATC 2718846 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || || || Sbjct 2718845 CAGAAGGAGTCGACTCTCCACCT 2718823 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 |||||||| ||||||||||| || |||||||| ||||| ||||| || ||||| |||| Sbjct 2719379 ATCCCTCCCGACCAGCAACGCCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGGACC 2719320 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || |||| || ||| |||| || ||||| || || ||||| || Sbjct 2719319 CTGTCCGACTACAACATCCAGAAGGAATCCACCCTTCATCTCGT 2719276 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| ||||| || ||||| |||||||| || ||| ||| Sbjct 2719532 CAGATCTTCGTTAAGACTCTCACCGGAAAGACCATCACACTCGAGGTCGAGTCCTCCGAC 2719473 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||| || |||||||| ||||||||||||||||| || Sbjct 2719472 ACCATTGACAACGTCAAGGCCAAGATTCAGGACAAAGAGGG 2719432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723365214552