Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bjerkandera_20adusta_20[JGI_20Bjead1_5F1_202011-05-24] 508 sequences; 42,730,300 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4 163 3e-35 seq1 156 4e-33 seq11 102 8e-17 >seq4 Length=1918071 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct 1157685 CCGCCACGGAGACGAAGCACCAAGTGCAGCGTACTCTCCTTCTGAATGTTGTAGTCGGAG 1157744 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||| ||||| |||||||| || |||||||| ||||| | || Sbjct 1157745 AGCGTGCGTCCATCTTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1157804 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| ||| | | | |||||| ||||| || Sbjct 1157805 ATACCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCAATCGTGTCGGAAGACTCGAC 1157863 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 1157864 CTCAAGAGTGATAGTCTTTCCGGTGAGGGTCTTGACGAAGATCTGCATG 1157912 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || || || || ||||||||||||||| ||||| ||| Sbjct 1158420 CCGCCACGAAGACGGAGGACGAGGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAG 1158479 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || |||||||||||||| ||||| |||| ||| || ||||| | |||| Sbjct 1158480 AGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGTTGCTGGTCGGGGGGA 1158539 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | | |||||| ||||| || Sbjct 1158540 ATGCCCTCCTTGTCC-TGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 1158598 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| || || || || |||| ||||| || || |||||||| Sbjct 1158599 TTCGAGCGTGATAGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1158646 Score = 138 bits (152), Expect = 1e-27 Identities = 163/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 41647 ACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTC 41706 ||||| || ||||| || || ||||||||| ||||| || || || |||||||| | Sbjct 1157977 ACGTACCA--AGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCCGACAGGGTGCGGCC 1158034 Query 41707 GTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTT 41766 ||| ||||||||||| || ||||| || || ||||| || |||| ||||| || ||||| Sbjct 1158035 GTCCTCGAGCTGCTTACCAGCGAAGATAAGACGCTGCTGATCCGGGGGAATGCCTTCCTT 1158094 Query 41767 GTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTA 41825 || | ||| | || || | ||| | | | |||||| ||| || ||||| | || | Sbjct 1158095 GT-CTTGAATCTTCGCCTTTACGTTGTCGATCGTGTCGGACGATTCGACCTCAAGGGTGA 1158153 Query 41826 TCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||||| |||||| ||||| |||||||| Sbjct 1158154 TCGTCTTTCCCGTCAACGTCTTGACGAAGATCTGCAT 1158190 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/103 (81%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 41653 CACCA-GATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 ||||| | || ||||| ||||||||| ||||| ||||| || || || || |||| | Sbjct 1158722 CACCAAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCTT 1158781 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||||||||||||| || |||||||| ||||| | ||| Sbjct 1158782 CGAGCTGCTTGCCGGCGAAGATTAGGCGCTGCTGGTCTGGGGG 1158824 >seq1 Length=3319996 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || || || ||||||||| ||||| || |||||| Sbjct 2719030 CCACCGCGAAGACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGAG 2719089 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| ||||||||||| || || |||||||| ||||| | |||| Sbjct 2719090 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGGCGCTGCTGGTCGGGGGGA 2719149 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| ||| |||| ||| | | | ||||| ||||| || Sbjct 2719150 ATGCCCTCCTTGTCCTGGATCTTTGCCTTC-ACGTTGTCGATCGTGTCCGAAGACTCGAC 2719208 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || ||||| || ||||| || ||||| ||||| |||||||| Sbjct 2719209 TTCGAGAGTGATCGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 2719256 Score = 154 bits (170), Expect = 1e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||| Sbjct 2718545 AGATGCAGCGTGCTCTCCTTCTGGATGTTATAGTCGGAGAGAGTGCGGCCATCCTCGAGC 2718604 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 |||||||| ||||| || || ||||| ||||| | || | | |||||| ||| ||| | Sbjct 2718605 TGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGTGGGATACCCTCCTTATCC-TGAAT 2718663 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || || | ||| | | | ||||| ||||||||||||| || || || || || Sbjct 2718664 CTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCC 2718723 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| ||||| |||||||| Sbjct 2718724 GGTGAGGGTCTTGACGAAGATCTGCAT 2718750 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||||||||| || || | || || |||||||| || ||||| Sbjct 2718837 CTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGACCATCCTCCAGCTGCTTCCCCGCGAA 2718896 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||||||||| || |||| || | | ||||||||| ||| || |||| ||| Sbjct 2718897 GATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTTCGCCTTC-ACGT 2718955 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | || ||| |||||| ||||| | ||| || || || || || || ||||| | Sbjct 2718956 TGTCGATGGTATCGGACGACTCGACCTCAAGCGTGATGGTCTTGCCGGTAAGAGTCTTGA 2719015 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 2719016 CGAAGATCTGCAT 2719028 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| || ||||| ||||||||| ||||| |||||| || || || | || || Sbjct 391470 CACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGTCCATCCTC 391411 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCT 41760 |||||||||||| || || || |||||||| ||||| | ||||| ||| Sbjct 391410 GAGCTGCTTGCCAGCAAAGATAAGGCGCTGCTGGTCTGGGGGAATGCT 391363 >seq11 Length=1123092 Score = 102 bits (112), Expect = 8e-17 Identities = 96/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| ||||||||| ||||| |||||| Sbjct 313847 CCACCACGCAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTA 313788 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || ||||| |||| |||||||||||||||||||| |||| |||||| ||||| ||||| Sbjct 313787 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGCGGG 313728 Query 41755 A 41755 | Sbjct 313727 A 313727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301064369600