Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3 113 3e-20 >seq3 Length=2284511 Score = 113 bits (124), Expect = 3e-20 Identities = 222/323 (69%), Gaps = 8/323 (2%) Strand=Plus/Minus Query 101945 ATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACT 102004 || || | ||| || ||||| | || || | ||||| | || || |||||| || ||| Sbjct 1792808 ATTCTCCGATCCGTGGGGTTGTTCTTGATCTTGTCAATGACCTCTTGTAATTGATCTACT 1792749 Query 102005 CCTTCTCCTTTATAATCG--CGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACT 102062 |||| ||| | || | | | | ||| || || |||||||| || |||||||| | Sbjct 1792748 CCTTTTCCATGGTAGTTGTCCTCGCAAGTCCCGTAC--TCTGCTCCAAAGTGCCTCCATT 1792691 Query 102063 GAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTA 102122 | ||||||||||| |||||||| || ||||| ||||| | | | || | ||| || | Sbjct 1792690 GGAATCCATACACCGGTCCAAGGTCACCTTCCCGTCTGTGAGATAGCCCCACTTTGTCCA 1792631 Query 102123 AAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCT-GAT-AGCTCTTT 102180 | | ||| || |||||| | ||||| || | |||||| || || | | | | || Sbjct 1792630 AGTACTCTCTCGAGCCATTCCCTTCCCAGATATTCACGCC--CTTCTCGCTCAATTTCTT 1792573 Query 102181 GCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATAC 102240 || ||| || | || |||| |||||| | ||| ||||| | ||||| | ||||| Sbjct 1792572 GCCGTCGGTGCAGCCGCTGACAAACCATAGCAGCTCTTCGATGACACCCCGTGTGAATAC 1792513 Query 102241 TCTCTTAGTAGTTAAAAGTGGAA 102263 || ||| ||||| | || |||| Sbjct 1792512 TCGCTTGGTAGTGAGTAGAGGAA 1792490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251164778008