Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-16 >seq7 Length=1004146 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | || |||| ||||| || |||||||| || ||||| ||||| | | Sbjct 973666 CCACCTCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 973607 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||||| ||||||||||| || | || |||| ||||||||| || Sbjct 973606 AGAGTTCTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGT 973547 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| || || | || Sbjct 973546 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGACC 973487 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | || || ||||| ||||| | ||| ||||| || || |||||| Sbjct 973486 TCGAGCGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCATT 973439 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | ||| |||| || | ||| |||||||| || ||||| ||||| | Sbjct 974229 CCACCTCTGAGTCGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 974170 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | ||||||||||||| || || || | || || | |||||||| || Sbjct 974169 AGGGTTCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGG 974110 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | ||| || ||| || ||| Sbjct 974109 ATACCCTCCTTGTCCTGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACC 974050 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 |||| || ||||| |||||||| Sbjct 974049 TCCAGCGTGATGGTTTTGCCGGT 974027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259158829728