Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=2284511 Score = 104 bits (114), Expect = 2e-17 Identities = 220/323 (68%), Gaps = 8/323 (2%) Strand=Plus/Minus Query 97309 ATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACG 97368 ||||| | ||| || ||||| | | || | | ||| | || | ||||||||| || Sbjct 1792808 ATTCTCCGATCCGTGGGGTTGTTCTTGATCTTGTCAATGACCTCTTGTAATTGATCTACT 1792749 Query 97369 CCTTCTCCACCATAATTGTGCTT--AAGACCTTGATATTCTGCTCCAAAATGCCTCCATT 97426 |||| |||| || |||| || ||| || || ||||||||||| |||||||||| Sbjct 1792748 CCTTTTCCATGGTAGTTGTCCTCGCAAGTCCCG--TACTCTGCTCCAAAGTGCCTCCATT 1792691 Query 97427 GGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTA 97486 |||||||||| || ||||||||||| ||||| ||| | | | | || | || || | Sbjct 1792690 GGAATCCATACACCGGTCCAAGGTCACCTTCCCGTCTGTGAGATAGCCCCACTTTGTCCA 1792631 Query 97487 AATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACC--AGATGCTGCAAGCTCTTT 97544 | || || || ||||| | ||||| || | ||| || ||| ||| || || Sbjct 1792630 AGTACTCTCTCGAGCCATTCCCTTCCCAGATATTCACGCCCTTCTCGCT-CAATTTC-TT 1792573 Query 97545 GCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC 97604 || ||| || | || |||| |||||| | || ||||| | ||||| | ||||| Sbjct 1792572 GCCGTCGGTGCAGCCGCTGACAAACCATAGCAGCTCTTCGATGACACCCCGTGTGAATAC 1792513 Query 97605 TCTCTTAGTTGTTAAGAGAGGAA 97627 || ||| || || | ||||||| Sbjct 1792512 TCGCTTGGTAGTGAGTAGAGGAA 1792490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783966188560