Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5 241 3e-58 seq7 87.8 4e-12 >seq5 Length=1773785 Score = 241 bits (266), Expect = 3e-58 Identities = 666/1009 (66%), Gaps = 28/1009 (3%) Strand=Plus/Plus Query 248734 ATGGTCGCCGATGACGTCCAC---ACCGTCATTCAGGACAACGCGCACCTCCTGGACGGC 248790 ||| |||||||||| ||| || | |||||| ||||||| | || |||| ||| Sbjct 908991 ATGATCGCCGATGATGTCTACCAAATCGTCAT---GGACAACAAGGACGTCCTCGACTCT 909047 Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 || || ||||| | ||| || | ||| | || || | |||||| || || ||| Sbjct 909048 GCCATCATCTACGACCGAGACTTTGCCTACAACTTTTTCGGTTTCAAGACCCTAGAGCGG 909107 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || ||| | | ||| | ||||||||||| |||||| |||||||||| | ||||| Sbjct 909108 TCCTACCTCTTGAGAATCAACGGCAAGATCGTCGAACGACCTCAGCACATGATTATGCGT 909167 Query 248911 GTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG 248970 || || ||||| || ||| | |||| || | || |||||||| |||| | ||| Sbjct 909168 GTCGCCGTCGGTATCCACGGTGCCAACATTGACCGAGTCCTCGAGACCTACAACCTCATG 909227 Query 248971 AGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAAT 249030 || || | | || || ||| | || || | |||||| | ||||| |||| Sbjct 909228 TCCGAGCGATACTTTACCCACGCCTCGCCAACATTGTTCAACTCGGGTACACCCAACCCC 909287 Query 249031 CAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGAC 249090 || || |||||| || || | ||||||| ||||||||| ||||||| || || || Sbjct 909288 CAAATGTCCTCGTGTTTCCTCGTCGCCATGCGAGACGACTCGATCGACGGTATCTACGAG 909347 Query 249091 ACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTC 249149 ||||| || || | || |||| || || || || || ||||||||| | | Sbjct 909348 ACGCTCAAGACCTGC-GCCCAGATCTCCAAGACTGCCGGTGGTATCGGTCTCCACATTCA 909406 Query 249150 CAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGT 249209 |||||||||||| |||||||| ||||| ||||| || || | | |||||||| Sbjct 909407 CAACATCCGAGCCAAGGGTTCCTACATTGCCGGTACCAACGGTTACTCCAACGGTATCGT 909466 Query 249210 ACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CG 249266 || | || | | || |||| ||| | | || |||||| || | || Sbjct 909467 TCCAATGCTAAGGGCATACGACGCCACGGCCCGATATGTCGACCAGGGTGGCAACAAGCG 909526 Query 249267 AAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGA 249326 | || |||||||||| || | || ||||||||||| | || || ||||| || Sbjct 909527 ACCTGGTGCGTTCGCCATCTACCTCGAGCCATGGCACGCCGACGTCTTCGACTTCCTCGA 909586 Query 249327 CTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTG 249386 | | | ||||||| |||| || || | |||| || || |||||||||| ||| || Sbjct 909587 CCTAAGAAAGAACCACGGTAAAGAAGAAGTTCGAGCACGAGATCTCTTCTACGCCCTCTG 909646 Query 249387 GGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCC 249446 | || |||| |||||||| || ||| || | || || || ||||| || | | || Sbjct 909647 GATCCCCGATCTGTTCATGAAGCGAGTCGAGTCGGATGGTGACTGGACCCTCATGTGCCC 909706 Query 249447 GTCCG-ACGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGACCAAGC-CTATAAG 249504 |||| | ||||||| |||| |||| | ||| ||||||| || || |||| ||| || Sbjct 909707 CTCCGAATGCCCCGG-CCTCGCCGATGTCCACAGCGCCGAGTTTGA-AAAGCTCTACGAG 909764 Query 249505 AAATACGA-----ATCCAACGGCATCGGCAAGACAATCAAGGCTCGGACCCT---TTTTG 249556 ||||| | || || | | ||||| ||||| || | | || || | Sbjct 909765 GGCTACGAGCGTGCTGGAAAGGGA--CGAAAGACCATCAAAGCGCAAAAGCTCTGGTTCG 909822 Query 249557 CGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTATTTGTTCAAAGACGCGT 249616 | | | | ||| |||||| ||||| || || || | | ||||||||| Sbjct 909823 CCA---TTCTCGAGGCCCAGACCGAGACTGGTACCCCATACATGCTCTACAAAGACGCCG 909879 Query 249617 GCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAG 249676 |||||||||| |||||| | || || || || ||| || || || || || | | Sbjct 909880 CCAACGCCAAGTCTAACCAGCAACACCTCGGCACGATCAAGTCCTCCAACCTGTGCACTG 909939 Query 249677 AGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGGC 249725 || | || | ||||| ||| || ||| | |||||||||||||| || Sbjct 909940 AGATCATCGAGTACTCTTCCCCCGACGAGGTCGCCGTCTGCAACCTCGC 909988 >seq7 Length=1004146 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 157263 CGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACT 157322 ||| |||||| ||| || ||||||| ||| |||||||| || ||||| ||||| | | Sbjct 956743 CGGACACTCTCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGT 956802 Query 157323 CGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGT-AGTCC 157381 |||| ||||||| ||| |||||||||||| || || | || |||| ||| Sbjct 956803 CGAAGGGGTTGGACACGTTCCACACCTTGTCGTTACCAAG-GGCGACAAGCAGTCGGTCG 956861 Query 157382 GCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATGAGCGCGACGGGA 157441 || ||||||| |||||||| |||| ||| | | || || ||||||| ||| || Sbjct 956862 GCGACAAACTCGATGTACTGGCACATGAGCTTAGAGTTCATTCCAATGAGCGAGACTGGC 956921 Query 157442 AGCGC 157446 || || Sbjct 956922 AGAGC 956926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766289938944