Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 417 7e-112 seq7 159 3e-34 >seq5 Length=1773785 Score = 417 bits (462), Expect = 7e-112 Identities = 1380/2125 (65%), Gaps = 44/2125 (2%) Strand=Plus/Minus Query 22115 GTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTCTTCAGA 22174 || ||||| || ||||| || | ||| || || || || || || |||||||| || Sbjct 910903 GTGAACTGAATCGCGTTGGCAGACGGCCGCGTTCGGAGGTAGTAGATACCCGTCTTGAGT 910844 Query 22175 CCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAGTCCATG 22234 ||| |||||| ||||||| || ||||| || | || | ||||| | || | Sbjct 910843 CCCCGCTTCCAGCCGTAAAAGTGCATCGAGGTGAGTTGAGAGAAGCTCGGGTTGGACAGG 910784 Query 22235 TACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATC 22294 | | ||||| ||||||||| ||||| || || ||||| || ||||| | | | Sbjct 910783 TGGATATTGAGACTCTGACTCTGGTCGATGAAAGCACCTCGGTCAGCGGCGAGGT----C 910728 Query 22295 AATGTACGCATC----GACATTTCCCATACGGTCTTGTACAGTTGCCT-GATCTCTAACG 22349 ||| || | || || ||||| || |||||||| | | |||| || || | | Sbjct 910727 GATGACAGCCTTTTGGGAGATCTCCCAGACAGTCTTGTAGA-TCGCCTTGAGGTCGGAGG 910669 Query 22350 GTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTAT 22409 | ||| || |||||| ||| || | | ||||| | || || || | | Sbjct 910668 GGATCTGAGGAATGTTCTGGATGGAACCACCAGCGGCGATGATGAGGTTCTTCATGTTGT 910609 Query 22410 CGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACCACTTGAAA 22467 ||||||| | ||| | | | |||| ||| | || ||| || || || || || Sbjct 910608 CGTTCCAGAGACCCAAGTTGATCAAGTCTCGCAGGAGCCATG--GGCAAACGACCTGGAA 910551 Query 22468 CTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATT 22527 || || |||| || ||||| ||| | | || ||| | || ||||| | || || Sbjct 910550 GTCTCCAGACAGCACTCGGCGGGCGTACAGCATCGACGTGTATGGCTCGAAGCACTCGTT 910491 Query 22528 GTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCT 22587 || || ||||||| |||||||| || ||||| || || | ||| |||||||||| Sbjct 910490 CCAGCCGAGAATCTGAGACGTCGAAGCCGTTGGCATTGGGGCGACCAGGAGCGAGTTTCG 910431 Query 22588 CAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGT 22647 || |||||||| | ||| || || |||| | ||||||||| || |||| || Sbjct 910430 CACACCGTGCTTGGCAATCTTGCTTCGGAGCTCGGTCCAGTCCCAGAGGTCGGTGGGT-- 910373 Query 22648 CACATTGTCCCACATATCGTATTGCAACACGCC--GCGAC-TCGCCGGGCTGCCTTCGTA 22704 || ||||||| ||| |||||| | ||| |||| | | || | | ||||| Sbjct 910372 -ACTCGACCCCACATGTCGAATTGCAGCTTGCCCTGCGAGATTGGCGATC---CCTCGTA 910317 Query 22705 CGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATA 22764 ||| |||||| || | || | || | ||||| || || | ||| ||| || Sbjct 910316 CGTCTCGTACTTGCCGTCCTTCTCAGCCATCTCGCACGAGGCTTCGAGTGCGGCGTGGTA 910257 Query 22765 TATAGTCTCGAAGATTTTCTTGTTCAATTCG---GCGGC-GGCGACGCTTTCGTACGGCA 22820 || ||||||||||| | |||| | || ||||| || || || | |||| Sbjct 910256 GATGGTCTCGAAGATCTGAATGTTGAGCTCTCGAGCGGCCGGAGAG----TCAAAGGGCA 910201 Query 22821 TACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTT 22880 || | || ||||||||| || | ||| || || || | |||| |||| || | Sbjct 910200 GTCGGAGAGCCATGAACGCGTCGGCGAGACCTTGGACACCGAGTCCGACGGGTCTGTGTC 910141 Query 22881 TCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCA 22940 || || ||| ||| ||||| | || || | || | ||| | ||| || Sbjct 910140 GCATGTTGGACGTTTTGGCCTCTTTGACGGGGTAGTAGTTTCGAGAGAT-GACCTGGTCG 910082 Query 22941 AGTTTCT-GGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGA 22998 || |||| ||| || | ||| || || | |||||||| |||| || Sbjct 910081 AGGTTCTTGGTGACGACTTTGGTGATCTCGTGAAGCTTCTTGAAGTCGTAGACGCGTCGT 910022 Query 22999 T---TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTC 23055 | ||| | |||||| | || |||| || || || ||||| ||||| |||||||| Sbjct 910021 TCCATGT-CGACAAACGCGGGGAGTGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTC 909963 Query 23056 TTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATT 23115 ||| | |||||| | || || || || || ||| |||| |||||||| | | Sbjct 909962 GGGGGAAGAGTACTCGATGATCTCAGTGCACAGGTTGGAGGACTTGATCGTGCCGAGGTG 909903 Query 23116 GCTCTGGTT-GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCT 23174 |||||| | || || | || | || |||||||||||||| || || || |||| Sbjct 909902 TTGCTGGTTAGACTTGGCGTTGGCG-GCGTCTTTGTAGAGCATGTATGGGGTACCAGTCT 909844 Query 23175 CGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACC 23234 || ||| | ||||| || || ||| | | || || | | ||| ||| || Sbjct 909843 CGGTCTGGGCCTCGAGAATGGCGAACCAGAGCTTTTGCGCTTTGATG-GTCTTTCGTCCC 909785 Query 23235 TG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGC 23292 | || | |||||| | ||| | | ||||| ||||| | || ||| ||||| Sbjct 909784 TTTCCAGCACGCTCGTAGCCCTCGTAGAGCTTTTCAAACTCGGCGCTGTGGACA-TCGGC 909726 Query 23293 CAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCT 23352 |||||||| ||| || |||||||| |||| || || || || | Sbjct 909725 GAGGCCGGGGCATTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTT 909666 Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 ||| || ||||| || ||||| || |||||||| || || || || || || || ||||| Sbjct 909665 CATGAACAGATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTT 909606 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 ||| ||||||| | | || | ||||| || ||||| || ||||| ||||||||||| Sbjct 909605 ACCGTGGTTCTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTA 909546 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | ||| ||||| || |||| ||| ||||| ||||| ||||| || ||||||||| || Sbjct 909545 GATGGCGAACGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTC 909486 Query 23533 GTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGA 23592 ||| | |||||||| || |||| ||||||||| ||| || || | || Sbjct 909485 GTATGCCCTTAGCATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGA 909426 Query 23593 ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCAT 23652 ||| || ||||| | |||||||| ||||| ||| || || ||| | | || || ||| Sbjct 909425 ACCCTTGGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTG 909366 Query 23653 CGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAA 23712 ||||| || || || |||||||| || ||||| ||| ||| | ||||| | Sbjct 909365 GGCGCAGGTCTTGAGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAG 909306 Query 23713 GAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTG 23772 ||||||||| |||||||| | ||||| ||| | | ||||| ||| || |||||| Sbjct 909305 GAAACACGAGGACATTTGGGGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTG 909246 Query 23773 CGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCC 23832 |||||||||| | ||||| || ||||| || |||| | | ||||||| | || Sbjct 909245 GGTAAAGTATCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACC 909186 Query 23833 GTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTT 23892 ||| ||||||| |||||| ||||| ||||||| ||||||| ||||| | |||||| Sbjct 909185 GTGGATACCGACGGCGACACGCATAATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTT 909126 Query 23893 AATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTC 23952 ||| | || || || || || | | || || || || ||| ||| ||| |||||| Sbjct 909125 GATTCTCAAGAGGTAGGACCGCTCTAGGGTCTTGAAACCGAAAAAGTTGTAGGCAAAGTC 909066 Query 23953 ACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATG 24012 || |||| | ||||| || | | || | ||| | || ||| | ||| Sbjct 909065 TCGGTCGTAGATGATGGCAGAGTCGAGGACGTCCTTGTTGTCCATGACGATTTGGTAGAC 909006 Query 24013 AAAATTCGATATCATCGGCGTTTTAACGCCGGTCTTTGGATCGATCGCTTCATACATATC 24072 | || | ||||| |||| || |||||||||||| | || | || || | || Sbjct 909005 ATCATCGGCGATCATGGGCGCCTTCTTGCCGGTCTTTGGGTTGACCCACTCGTAGAGGTC 908946 Query 24073 GATAATGACATCGAAAAAAGAATCTTTAGTCTCCTTGTGCAAATTAGACACGGCCAATCT 24132 | || ||| || | || || | || ||||||||||| | || || | ||| | | Sbjct 908945 GTGAACGACGGCGGAGAAGGATTTCTTGGTCTCCTTGTGGAGGTTGGAGATGGCTATACG 908886 Query 24133 AGCCGCAAGCAACGAATAGTCGGAATGATCGATGGTCATGGCCGCTGCCGTCTCGGCGAT 24192 || || || | | ||||||| || | |||| | | ||| || |||||||| Sbjct 908885 GGCGGCGAGGATGGCGTAGTCGGGGTGGGTGGTGGTGAGGTACGCGGCGGTCTCGGCTGC 908826 Query 24193 TAGATTGTCCAATTCAGCGGTGGTC 24217 || ||||| | || |||||||| Sbjct 908825 GAGGTTGTCAAGCTCGACGGTGGTC 908801 >seq7 Length=1004146 Score = 159 bits (176), Expect = 3e-34 Identities = 394/590 (67%), Gaps = 12/590 (2%) Strand=Plus/Minus Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || || || |||||||| || ||| | |||||| || | Sbjct 957340 GAGAACATCCACTCCGAGACCTACTCTCTCCTCATCGACACATACATCAAGGACGCCGCC 957281 Query 57867 -GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 || ||| || |||||| | || ||||| || || ||| ||| || ||||| | Sbjct 957280 CGACGAACATAC-CTGTTCGAGGCTATCGACACCATCCCCTGCATCCAGAAAAAGGCCAA 957222 Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTT 57985 ||| | |||| ||||| || | | || ||||| ||| | || ||||| || Sbjct 957221 CTGGGCCCTCAAGTGGATCTCGGACGACCGATCGACTTTCGCTGAGCGACTGATCGCCTT 957162 Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAA 58045 ||||||||||| ||||| ||||| || || || || | || || ||| ||||||| Sbjct 957161 TGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCTTTCGCCTCGATCTTCTGGTTGAAGAA 957102 Query 58046 ACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCT 58105 || || || |||||||| || || || ||||||||||| ||| | ||||||||||| Sbjct 957101 GCGAGGTCTCATGCCCGGACTCACCTTCTCGAACGAGTTGATCTCGAGGGACGAGGGTCT 957042 Query 58106 CCATACTGATTTTGCGTGCCTAATGTACTCTCACAT-TGTCAATAAACCGACGCGGGATC 58164 ||| || || ||||| || || | | | | ||| | | | | | || || | || Sbjct 957041 CCACACCGACTTTGCCTGTCTCCTCTTCACCCACCTCCGACGACGACCCCAC-CCAGACA 956983 Query 58165 GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCC 58224 || | || |||| ||||| ||| |||||| | ||||| ||||||| || | Sbjct 956982 CTGTCGAGAGGATCATCAAAGAGGCCGTCAAGATCGAGCAAGAGTTCCTCACCGACGCTC 956923 Query 58225 TACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTG 58284 | || || | | | || |||||| | | | |||| ||||||| |||||||| | Sbjct 956922 TGCCAGTCTCGCTCATTGGAATGAACTCTAAGCTCATGTGCCAGTACATCGAGTTTGTCG 956863 Query 58285 CCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA----TTACAACACGAAAAATCCG 58340 ||||| |||| | ||| | |||| | || || | ||| | || || Sbjct 956862 CCGACCGACTGCTTGTCGCCC---TTGG-TAACGACAAGGTGTGGAACGTGTCCAACCCC 956807 Query 58341 TTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || |||||| | ||||||||||| |||||||| | ||||| ||||| Sbjct 956806 TTCGACTTTATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 956757 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 31213 TCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAA 31272 ||| || |||||||| ||||| | || || || | || |||| |||| | ||||| Sbjct 974023 TCTCACCGGCAAAACCATCACGCTGGAGGTCGAGTCCTCTGACACGATCGACAATGTCAA 974082 Query 31273 ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGG 31332 | || || ||||||||| || | || ||||||||||| ||||| || |||||||| Sbjct 974083 ATCGAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAACGTCTCATCTTCGCTGG 974142 Query 31333 CAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCT 31392 || ||| |||| ||| | || ||||||| || ||||| || || || |||||||| Sbjct 974143 AAAGCAGCTGGAGGACGGTCGAACCCTGAGCGACTACAACATCCAGAAGGAGTCGACTCT 974202 Query 31393 TCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| |||| || |||| || || ||| Sbjct 974203 TCACTTGGTCCTCCGACTCAGAGGTGGT 974230 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || |||||||| |||| || ||| | || Sbjct 973440 ATGCAGATCTTCGTCAAGACGCTCACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 973499 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 973500 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATACCACCTGACCAG 973559 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||||||| | || ||| | ||| || ||| || ||| Sbjct 973560 CAGCGACTCATCTTCGCCGGCAAACAGCTCGAGGACGGCAGAACTCTGTCCGACTACAAC 973619 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| | || ||||| || | ||| | || |||| Sbjct 973620 ATCCAGAAGGAGTCGACCTTGCACCTGGTTCTGCGTCTGCGAGGTGGTA 973668 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || |||||||| |||||| |||| || || | || Sbjct 972875 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACCCTCGAGGTCGAGTCTTCG 972934 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| || | || || |||||| Sbjct 972935 GACACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 972994 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| | || ||||| || || ||| |||||||| Sbjct 972995 CAGCGATTGATCTTCGCCGGAAAGCAGCTGGAAGAC 973030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766355423360