Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 181 1e-40 seq7 111 2e-19 >seq5 Length=1773785 Score = 181 bits (200), Expect = 1e-40 Identities = 436/657 (66%), Gaps = 2/657 (0%) Strand=Plus/Minus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | | ||| || || || || ||||| ||||| || ||||| || ||| Sbjct 909706 GGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTTCATGAACAGATCGGGGATC 909647 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || || ||||||| || || | ||| || || || |||||| | || Sbjct 909646 CAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTTACCGTGGTTCTTTCTTAGG 909587 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 |||||||| | | | || | ||||| || || | ||| ||||| | | ||||| Sbjct 909586 TCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGT 909527 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | |||| || ||| | || | || | ||||||| Sbjct 909526 CGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTCGTATGCCCTTAGCATTGGA 909467 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | |||||||| || ||| |||||||||| || ||| || |||| || || || Sbjct 909466 ACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTTGGCTCGGATGTTG 909407 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593 ||| ||||| || || || || | || ||||| ||||| || | ||| Sbjct 909406 TGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGCGTC 909347 Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653 || ||||| || || || || || |||| | || ||||| ||||||||| Sbjct 909346 TCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAGGAAACACGAGGACATTTGG 909287 Query 63654 TGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63713 | | || |||| || || || || || || ||||| ||||| || || || Sbjct 909286 GGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAAGTATCGCTCGGAC 909227 Query 63714 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGAC 63772 | || ||||| ||||| | || ||| || | || | || || || || ||||| Sbjct 909226 ATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCG-TGGATACCGACGGCGAC 909168 Query 63773 ACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGA 63832 |||||| | |||||||||||||| ||| || || ||| ||| ||| |||| | |||||| Sbjct 909167 ACGCATAATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATTCTCAAGAGGTAGGA 909108 Query 63833 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63889 || | || || ||||| ||| ||||||| | ||||||||| ||||| || || Sbjct 909107 CCGCTCTAGGGTCTTGAAACCGAAAAAGTTGTAGGCAAAGTCTCGGTCGTAGATGAT 909051 >seq7 Length=1004146 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| || || ||| ||| ||||||||||| || || || ||||| || || ||||| Sbjct 957023 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAG 957082 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 ||||||||| || || ||||| || | ||| || || || ||||| || || || ||||| Sbjct 957083 TCCGGGCATGAGACCTCGCTTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAA 957142 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTC 33736 ||| || || || || |||||||| || |||| ||| Sbjct 957143 GATACCCTCGACGGCGGCAAAGGCGATCAGTCGCTC 957178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817537018240