Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5 167 3e-36 seq7 105 9e-18 >seq5 Length=1773785 Score = 167 bits (184), Expect = 3e-36 Identities = 440/669 (66%), Gaps = 2/669 (0%) Strand=Plus/Minus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || ||||| | | ||| || || || || ||||| ||||| || ||||| || ||| Sbjct 909706 GGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTTCATGAACAGATCGGGGATC 909647 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || || | ||||| | || | ||| || || || |||||| | || Sbjct 909646 CAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTTACCGTGGTTCTTTCTTAGG 909587 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 |||||||| | | | || ||||| || || | ||| ||||| | | ||||| Sbjct 909586 TCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGT 909527 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || ||||| || | |||| || ||| | || | || | ||||||| Sbjct 909526 CGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTCGTATGCCCTTAGCATTGGA 909467 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326 | ||||| ||||| ||| ||||| |||| || ||| || | || || || || Sbjct 909466 ACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTTGGCTCGGATGTTG 909407 Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 66386 ||| ||||| || || || || | || ||||| ||||| || | ||| Sbjct 909406 TGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGCGTC 909347 Query 66387 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 66446 || ||||| || || || || || |||| | || ||||| ||||||||| Sbjct 909346 TCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAGGAAACACGAGGACATTTGG 909287 Query 66447 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 66506 | || |||| || || || || || || ||||| ||||| || || || Sbjct 909286 GGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAAGTATCGCTCGGAC 909227 Query 66507 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGAC 66565 | || ||||| ||||| | || ||| || | || | || || || || ||||| Sbjct 909226 ATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCG-TGGATACCGACGGCGAC 909168 Query 66566 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 66625 |||||| | |||||||||||||| ||| ||||||||| ||| ||| |||| | |||||| Sbjct 909167 ACGCATAATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATTCTCAAGAGGTAGGA 909108 Query 66626 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 66685 || | || || ||||| ||| ||||||| | ||||||||| ||||| || || | Sbjct 909107 CCGCTCTAGGGTCTTGAAACCGAAAAAGTTGTAGGCAAAGTCTCGGTCGTAGATGATGGC 909048 Query 66686 CGAGTTGAG 66694 |||| ||| Sbjct 909047 AGAGTCGAG 909039 >seq7 Length=1004146 Score = 105 bits (116), Expect = 9e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| || || ||| ||| ||||||||||| || || || ||||| || || ||||| Sbjct 957023 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAG 957082 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 ||||||||| || || ||||| || | ||| || || || || || || ||||| ||||| Sbjct 957083 TCCGGGCATGAGACCTCGCTTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAA 957142 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 36312 || || || || || |||||||| || |||| ||| Sbjct 957143 GATACCCTCGACGGCGGCAAAGGCGATCAGTCGCTC 957178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172734182720