Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 4e-14 >seq7 Length=1004146 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||||| ||| | ||| | || ||||| || || ||||| || ||| | Sbjct 973666 CCACCTCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 973607 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||| ||||||||||| || || |||| || || ||||| || || ||| Sbjct 973606 AGAGTTCTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGT 973547 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| | || | || | | || | ||||| | | || || Sbjct 973546 ATGCCCTCCTTGTC-CTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGAC 973488 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||| ||||| | ||| || ||||| || ||||| Sbjct 973487 CTCGAGCGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCAT 973440 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA--GTCTT 139613 || ||||||| || ||||| || || ||||| || ||||||| || |||| ||| | Sbjct 974211 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT--TCGACCGTCCT 974154 Query 139614 CGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 139673 | ||||| || ||||| |||| ||||||||||| ||||| || || || || ||||| Sbjct 974153 CCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCT 974094 Query 139674 TGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 ||| || ||| | | || | ||||| | || ||| ||||| | || | || | Sbjct 974093 GGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATGGTTT 974034 Query 139734 TGCCGGT 139740 ||||||| Sbjct 974033 TGCCGGT 974027 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | || | ||| | ||| | |||||||| || || ||||| || ||| | Sbjct 973948 CCACCTCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 973889 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | || || |||||||||||||| ||||||| |||||||| || || || Sbjct 973888 AAGGTTCGTCCA-TCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGGGG 973830 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 ||||| || ||||| ||| | || | || | | || | ||||| | | ||||| Sbjct 973829 AATGCCCTCCTTGTC-CTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCA 973771 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAA 139743 |||| | ||| | ||||| || ||||| Sbjct 973770 CCTCCAGGGTGATGGTCTTTCCTGTCAA 973743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063950393600