Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 179 5e-40 seq7 107 3e-18 seq1 86.0 9e-12 >seq5 Length=1773785 Score = 179 bits (198), Expect = 5e-40 Identities = 459/696 (66%), Gaps = 2/696 (0%) Strand=Plus/Minus Query 79879 ACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT 79938 |||||| | | || || |||||| || ||||| | | ||| || ||||| || Sbjct 909733 ACATCGGCGAGGCCGGGGCATTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTCG 909674 Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||| ||||| || ||||| || ||||| || || || ||||||| | || | Sbjct 909673 ACTCGCTTCATGAACAGATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACT 909614 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || || || |||||| | || |||||||| | | | || | ||||| || Sbjct 909613 TCTTCTTTACCGTGGTTCTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGC 909554 Query 80059 TCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 80118 || | ||| ||||| | | || ||||| ||||| || ||||| || | |||| || Sbjct 909553 TCGAGGTAGATGGCGAACGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCC 909494 Query 80119 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAG 80178 ||| | || | || | |||||||| ||||| ||||| ||| ||||| |||| Sbjct 909493 GTGGCGTCGTATGCCCTTAGCATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCA 909434 Query 80179 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 80238 || ||| || |||| || || || ||| ||||| || || || || | || Sbjct 909433 ATGTAGGAACCCTTGGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTG 909374 Query 80239 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATG 80298 ||||| ||||| || | ||| || ||||| || || || || || |||| Sbjct 909373 GAGATCTGGGCGCAGGTCTTGAGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATG 909314 Query 80299 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 80358 | || ||||| ||||||||| | || |||| || || || || || Sbjct 909313 GCGACGAGGAAACACGAGGACATTTGGGGGTTGGGTGTACCCGAGTTGAACAATGTTGGC 909254 Query 80359 GAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATA 80418 || ||||| ||||| || || |||| || ||||| ||||| | || || || Sbjct 909253 GAGGCGTGGGTAAAGTATCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTCAATG 909194 Query 80419 TCC-CATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 80477 | || | || || || || ||||||||||| | |||||||||||||| ||| ||||| Sbjct 909193 TTGGCACCG-TGGATACCGACGGCGACACGCATAATCATGTGCTGAGGTCGTTCGACGAT 909135 Query 80478 CTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537 |||| || ||| |||| | ||| || || | || || ||||| ||| ||||||| Sbjct 909134 CTTGCCGTTGATTCTCAAGAGGTAGGACCGCTCTAGGGTCTTGAAACCGAAAAAGTTGTA 909075 Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 | ||||||||| ||||| || || | |||| ||| Sbjct 909074 GGCAAAGTCTCGGTCGTAGATGATGGCAGAGTCGAG 909039 >seq7 Length=1004146 Score = 107 bits (118), Expect = 3e-18 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || ||| ||| ||||||||||| || || | ||||| || || ||||| Sbjct 957023 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAG 957082 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 ||||||||| || || ||||| || | ||| || || || || || || ||||| ||||| Sbjct 957083 TCCGGGCATGAGACCTCGCTTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAA 957142 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGCT-GTCATG 50135 ||| || || || ||||||||||| | |||| ||| | || | | || | ||| Sbjct 957143 GATACCCTCGACGGCGGCAAAGGCGATCAGTCGCTCAGCGAAAGTCGATCGGTCGTCCGA 957202 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 |||||||| | ||||| | |||||| || Sbjct 957203 GATCCACTTGAGGGCCCAGTTGGCCTTTTT 957232 >seq1 Length=8012737 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040 |||||||| || || || | || ||||| || || || |||||||| || || | ||| Sbjct 7388652 CCCTCGTCCCTGCTGATCAACTCATTGGAGAAAGTCAGGCCGGGCATGAGACCCCTCTTC 7388711 Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 || | ||| || |||| ||||| || ||||| ||||||||||| || || || || Sbjct 7388712 TTCAACCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATTCCCTCGACGCAAGCGAAA 7388771 Query 50101 GCAACAAGTCTC 50112 ||||| |||||| Sbjct 7388772 GCAACCAGTCTC 7388783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268728173120