Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5 190 3e-43 seq7 111 2e-19 >seq5 Length=1773785 Score = 190 bits (210), Expect = 3e-43 Identities = 445/669 (67%), Gaps = 2/669 (0%) Strand=Plus/Minus Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 || ||||| | | ||| || || || || ||||| ||||| || ||||| || ||| Sbjct 909706 GGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTTCATGAACAGATCGGGGATC 909647 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 || || || || ||||||| | || | ||| || || || |||||| | || Sbjct 909646 CAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTTACCGTGGTTCTTTCTTAGG 909587 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 |||||||| | | | || | ||||| || || | ||| ||||| | | ||||| Sbjct 909586 TCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGT 909527 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 || ||||| || ||||| || | |||| || ||| | || | || | ||||||| Sbjct 909526 CGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTCGTATGCCCTTAGCATTGGA 909467 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482 | |||||||| || ||| |||||||||| || ||| || |||| || || || Sbjct 909466 ACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTTGGCTCGGATGTTG 909407 Query 63483 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63542 ||| ||||| || || || || | || ||||| ||||| || | ||| Sbjct 909406 TGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGCGTC 909347 Query 63543 TCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63602 || |||||||| || || || || |||| | || ||||| ||||||||| Sbjct 909346 TCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAGGAAACACGAGGACATTTGG 909287 Query 63603 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63662 | || |||| || || || || || || ||||| ||||| || || || Sbjct 909286 GGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAAGTATCGCTCGGAC 909227 Query 63663 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGAC 63721 | || ||||| ||||| | || ||| || | || | || || || || ||||| Sbjct 909226 ATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCG-TGGATACCGACGGCGAC 909168 Query 63722 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA 63781 |||||| | |||||||||||||| ||| ||||||||| ||| ||| |||| | |||||| Sbjct 909167 ACGCATAATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATTCTCAAGAGGTAGGA 909108 Query 63782 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63841 || | || || ||||| ||| ||||||| | ||||||||| ||||| || || | Sbjct 909107 CCGCTCTAGGGTCTTGAAACCGAAAAAGTTGTAGGCAAAGTCTCGGTCGTAGATGATGGC 909048 Query 63842 CGAGTTGAG 63850 |||| ||| Sbjct 909047 AGAGTCGAG 909039 >seq7 Length=1004146 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || ||| ||| ||||||||||| || || | ||||| || || ||||| Sbjct 957023 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAG 957082 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 ||||||||| || || ||||| || | ||| || || || ||||| || ||||| ||||| Sbjct 957083 TCCGGGCATGAGACCTCGCTTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAA 957142 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTC 33458 ||| || || || || |||||||| || |||| ||| Sbjct 957143 GATACCCTCGACGGCGGCAAAGGCGATCAGTCGCTC 957178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947137705280