Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 273 6e-68 >seq5 Length=1773785 Score = 273 bits (302), Expect = 6e-68 Identities = 1144/1789 (64%), Gaps = 34/1789 (2%) Strand=Plus/Plus Query 363389 TTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTG 363448 ||||||| | ||||| | ||| |||||||| | | ||||| || | || || | Sbjct 909082 TTTTCGGTTTCAAGACCCTAGAGCGGTCCTACCTCTTGAGAATCAACGGCAAGATCGTCG 909141 Query 363449 AACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATG 363508 |||| || ||||| ||| | |||||||| || | |||||||| | | | |||| Sbjct 909142 AACGACCTCAGCACATGATTATGCGTGTCGCCGTCGGTATCCACGGTGCCAACATTGA-- 909199 Query 363509 CCGCGA--TTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCA 363564 ||| | | || || || || || | || | | | || || || |||||| ||||| Sbjct 909200 CCGAGTCCTCGAGACCTACAACCTCAT--GTCCGAGCGATACTTTACCCACGCCTCGCCA 909257 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| ||| ||| | || || | || || || ||||| || || || || | ||| Sbjct 909258 ACATTGTTCAACTCGGGTACACCCAACCCCCAAATGTCCTCGTGTTTCCTCGTCGCCATG 909317 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 ||||| || ||||| ||||||| || || || |||| || || | || |||||| Sbjct 909318 CGAGACGACTCGATCGACGGTATCTACGAGACGCTCAAGACCTGCGCCCAGATCTCCAAG 909377 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGC 363744 | ||| || || || ||| | || ||||| | || || || |||||| | Sbjct 909378 ACTGCCGGTGGTATCGGTCTCCACATTCACAACATCCGAGCCAAGGGTTCCTACATTGCC 909437 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 || || || ||||| || || | ||||| ||||| | | | ||| || || Sbjct 909438 GGTACCAACGGTTACTCCAACGGTATCGTTCCAATGCTAAGGGCATACGACGCCACGGCC 909497 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 | || |||||||||||||| ||||| || ||||| || || || |||||||| Sbjct 909498 CGATATGTCGACCAGGGTGGCAACAAGCGACCTGGTGCGTTCGCCATCTACCTCGAGCCA 909557 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 || ||||| | || || || || || || | || ||| || ||||| ||| | Sbjct 909558 TGGCACGCCGACGTCTTCGACTTCCTCGACCTAAGAAAGAACCACGGTAAAGAAGAAGTT 909617 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 || ||||| ||||| ||||| || || ||| | | || | || |||||||| || ||| Sbjct 909618 CGAGCACGAGATCTCTTCTACGCCCTCTGGATCCCCGATCTGTTCATGAAGCGAGTCGAG 909677 Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | ||| | ||| | ||||| |||||| || || || ||||||| Sbjct 909678 TCGGATGGTGACTGGACCCTCATGTGCCCCTCCGAATGCCCCGGCCTCGCCGATGTCCAC 909737 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 | | ||| | || || ||||| || || | ||||||| || ||||| Sbjct 909738 AGCGCCGAGTTTGAAAAGCTCTACGAGGGCTACGAGCGTGCTGGAAAGGGACGAAAGACC 909797 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || || ||||| ||||| ||||| | || | |||| ||||| || || || Sbjct 909798 ATCAAAGCGCAAAAGCTCTGGTTCGCCATTCTCGAGGCCCAGACCGAGACTGGTACCCCA 909857 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 || ||| | |||||||| | |||| |||||| |||||||| ||||| || || || Sbjct 909858 TACATGCTCTACAAAGACGCCGCCAACGCCAAGTCTAACCAGCAACACCTCGGCACGATC 909917 Query 364225 CAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 || |||||| || || ||||| || || ||| | | ||||||||| ||||| Sbjct 909918 AAGTCCTCCAACCTGTGCACTGAGATCATCGAGTACTCTTCCCCCGACGAGGTCGCCGTC 909977 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTAC-------TTTTGA 364337 || ||||| || || |||| || || |||||||| | |||| || | || Sbjct 909978 TGCAACCTCGCTTCCCTCGCACTCCCCGCGTTTGT-CGACATGGAACGACGCGTCTACGA 910036 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 | | || | ||| | || | ||| | | || || |||||| |||| ||| Sbjct 910037 CTTCAAGAAGCTTCACGAGATCACCAAAGTCGTCACCAAGAACCTCGACCAGGTCATCTC 910096 Query 364398 CAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457 || || || || | || ||| | || || ||||| || | || | || Sbjct 910097 TCGAAACTACTACCCCGTCAAAGAGGCCAAAACGTCCAACATGCGACACAGACCCGTCGG 910156 Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCC 364517 || ||||| || || ||||| |||| || ||| ||| || | ||||| || || Sbjct 910157 ACTCGGTGTCCAAGGTCTCGCCGACGCGTTCATGGCTCTCCGACTGCCCTTTGACTCTCC 910216 Query 364518 TGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGC 364577 | |||||| | || || | ||||||| || || || || |||||| | || Sbjct 910217 GGCCGCTCGAGAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCCGCACTCGAAGC 910276 Query 364578 TTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTC 364637 ||||| || |||| | | | || |||||| || || ||||| || || | || Sbjct 910277 CTCGTGCGAGATGGCTGAGAAGGACGGCAAGTACGAGACGTACGAGGGATCGCCAATCTC 910336 Query 364638 GCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG--CCATCTGTCCGATGGAACTGG 364695 |||||| || | || || || | ||| ||| | || | | || ||| ||||| Sbjct 910337 GCAGGGCAAGCTGCAATTCGACATGTGG--GGTCGAGTACCCACCGACCTCTGGGACTGG 910394 Query 364696 GATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCC 364755 ||| || ||| || ||||| ||| || ||||| ||| | || || Sbjct 910395 ACCGAGCTCCGAAGCAAGATTGCCAAGCACGGTGTGCGAAACTCGCTCCTGGTCGCCCCA 910454 Query 364756 ATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACA 364815 ||||| |||||||| || | ||||| ||||| |||||||||||||| || |||| Sbjct 910455 ATGCCAACGGCTTCGACGTCTCAGATTCTCGGCTGGAACGAGTGCTTCGAGCC--ATACA 910512 Query 364816 AG-CAAT-CTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873 | | || || || | ||||| || || || ||||| || | ||| ||| | | Sbjct 910513 CGTCGATGCTGTACGCCCGCCGAGTGCTGTCTGGAGACTTCCAGGTCGTTTGCCCATGGC 910572 Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933 | | || | | || || || ||| |||| |||||||||| ||||||| Sbjct 910573 TCCTGCGAGACTTGATCAACTTGGGTCTCTGGAACGACAACATGAAGAACCTCATCATCG 910632 Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993 ||||| |||||| | ||||||||||| | || || || ||| | || |||| Sbjct 910633 CCGCTGGTGGTTCCATCCAGAACATTCCTCAGATCCCCTCCGACCTCAAGGCGATCTACA 910692 Query 364994 AAACCGTATGGGAAATTTCCATGCGAA---CTCTCATTGATATGGCGGCCGATCGCGGTG 365050 | || || ||||| || ||| | || || |||| || | || || || || |||| Sbjct 910693 AGACTGTCTGGGAGATCTCC---CAAAAGGCTGTCATCGACCTCGCCGCTGACCGAGGTG 910749 Query 365051 CTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCCAA 365108 |||| ||| ||||| ||| || | | ||| || || | | || | || | | | Sbjct 910750 CTTTCATCGACCAGAGTCAG-AGTCTCA-ATATCCACCTGTCCAACCCGAGCTTCTCTCA 910807 Query 365109 GCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 || || || ||||| || ||||| ||||| || || ||||| ||| Sbjct 910808 ACTCACCTCGATGCACTTTTACGGCTGGAAGCGGGGACTCAAGACGGGT 910856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353466406256