Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq7 140 3e-28 seq1 84.2 2e-11 >seq7 Length=1004146 Score = 140 bits (154), Expect = 3e-28 Identities = 273/395 (69%), Gaps = 14/395 (4%) Strand=Plus/Minus Query 46100 AGAAAA---CCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG--CGACTTTCGCCGA 46154 |||||| || ||||||| | ||||||||| | | |||| |||||||||| || Sbjct 957234 AGAAAAAGGCCAACTGGGCCCTCAAGTGGATCTC--GGACGACCGATCGACTTTCGCTGA 957177 Query 46155 GCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCAT 46214 ||| || | |||||||| || ||||| |||| || ||||| ||| ||| | || Sbjct 957176 GCGACTGATCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCTTTCGCCTCGAT 957117 Query 46215 CTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATAT 46273 ||| | | || || | ||| | |||||||||| || || || |||||| |||| | Sbjct 957116 CTTCTGGTTGAAGAAGCGAGGTC-TCATGCCCGGACTCACCTTCTCGAACGAGTTGATCT 957058 Query 46274 CGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGC-AC 46332 || | |||||||| || || || |||||||| |||||| || ||| | | | | || Sbjct 957057 CGAGGGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTT---CACCCACCTCCGAC 957001 Query 46333 GACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAG 46392 ||| | | | || ||||| || ||| || |||| ||||| || || ||| | Sbjct 957000 GACGACCCCAC-CCAGACACTGTCGAGAGGATCATCAAAGAGGCCGTCAAGATCGAGCAA 956942 Query 46393 GAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGC 46452 ||||| | || | ||| ||||| | | || | || |||||| | || |||||| Sbjct 956941 GAGTTCCTCACCGACGCTCTGCCAGTCTCGCTCATTGGAATGAACTCTAAGCTCATGTGC 956882 Query 46453 GACTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 | |||||||||||||| || ||||||||||| || Sbjct 956881 CAGTACATCGAGTTTGTCGCCGACCGACTGCTTGT 956847 Score = 113 bits (124), Expect = 4e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | ||||||||||| || |||||||| ||||||| ||| || | Sbjct 974217 CGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGACCG 974158 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| |||||||| || ||| |||| | ||| |||||||| || ||||| || || ||| Sbjct 974157 TCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTG 974098 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| ||| |||| | || | || || | |||||||| || | || | | Sbjct 974097 TCCTGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATG 974038 Query 131200 GTTTTACCGGTTAGA 131214 ||||| ||||| ||| Sbjct 974037 GTTTTGCCGGTGAGA 974023 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || | || | |||||||||||| || |||||||| ||| | Sbjct 973666 CCACCTCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 973607 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| ||||| ||||| ||| |||| | ||||||||||| || || Sbjct 973606 AGAGTTCTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGT 973547 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | || || | || |||| Sbjct 973546 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGACC 973487 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || ||||| |||||||| Sbjct 973486 TCGAGCGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCAT 973440 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 ||| || |||||||| || ||| |||| || ||||||||||| |||||||| || || || Sbjct 973030 GTCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTT 972971 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||| || ||||| | || | || || | ||||||| |||| ||| | Sbjct 972970 GTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCCGAAGACTCGACCTCGAGGGTGAT 972911 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||||| || || || || || || || |||||||| Sbjct 972910 GGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 972875 >seq1 Length=8012737 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| || || || | || | ||| |||||||| || |||||||| ||| | Sbjct 2303463 CCACCTCTCAATCGAAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 2303522 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| || || || || ||| |||| | ||||||||||| || ||| Sbjct 2303523 AGAGTTCGACCATCCTCGAGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGG 2303582 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 2303583 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACC 2303642 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 || | ||| | |||||| || || || Sbjct 2303643 TCAAGGGTGATGGTTTTGCCCGTGAG 2303668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012752798720