Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 179 5e-40 seq7 105 8e-18 >seq5 Length=1773785 Score = 179 bits (198), Expect = 5e-40 Identities = 459/696 (66%), Gaps = 2/696 (0%) Strand=Plus/Minus Query 63011 ACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63070 |||| | | || || || ||||| || ||||| | | ||| || || || || Sbjct 909733 ACATCGGCGAGGCCGGGGCATTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTCG 909674 Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63130 ||||| ||||| || ||||| || ||||| || || || ||||||| | || | | Sbjct 909673 ACTCGCTTCATGAACAGATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACT 909614 Query 63131 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63190 || || || || |||||| | || |||||||| | | | || | ||||| || Sbjct 909613 TCTTCTTTACCGTGGTTCTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGC 909554 Query 63191 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63250 || | ||| ||||| | | ||||| || ||||| || ||||| || | |||| || Sbjct 909553 TCGAGGTAGATGGCGAACGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCC 909494 Query 63251 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAG 63310 ||| | || | || | |||||||| ||||| ||||| ||| ||||| || | Sbjct 909493 GTGGCGTCGTATGCCCTTAGCATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCA 909434 Query 63311 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63370 || ||| || |||| || || || ||| ||||| || || || || | || Sbjct 909433 ATGTAGGAACCCTTGGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTG 909374 Query 63371 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 63430 ||||| ||||| || | ||| || ||||| || || || || || |||| Sbjct 909373 GAGATCTGGGCGCAGGTCTTGAGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATG 909314 Query 63431 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 63490 | || ||||| ||||||||| | || |||| || || || || || Sbjct 909313 GCGACGAGGAAACACGAGGACATTTGGGGGTTGGGTGTACCCGAGTTGAACAATGTTGGC 909254 Query 63491 GAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63550 || ||||| ||||| || || || | || ||||| ||||| | || ||| || Sbjct 909253 GAGGCGTGGGTAAAGTATCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTCAATG 909194 Query 63551 TCC-CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609 | || | || || || || ||||||||||| | |||||||||||||| ||| ||||| Sbjct 909193 TTGGCACCG-TGGATACCGACGGCGACACGCATAATCATGTGCTGAGGTCGTTCGACGAT 909135 Query 63610 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669 |||| ||| ||| |||| | |||||| || | || || ||||| ||| ||||||| Sbjct 909134 CTTGCCGTTGATTCTCAAGAGGTAGGACCGCTCTAGGGTCTTGAAACCGAAAAAGTTGTA 909075 Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 | ||||||||| ||||| || || | |||| ||| Sbjct 909074 GGCAAAGTCTCGGTCGTAGATGATGGCAGAGTCGAG 909039 >seq7 Length=1004146 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| || || ||| ||| ||||||||||| || || || ||||| || || ||||| Sbjct 957023 ACAGGCAAAGTCGGTGTGGAGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAG 957082 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 ||||||||| || || ||||| || | ||| || || || || || || ||||| ||||| Sbjct 957083 TCCGGGCATGAGACCTCGCTTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAA 957142 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC 32815 || || || || || |||||||| || |||| ||| Sbjct 957143 GATACCCTCGACGGCGGCAAAGGCGATCAGTCGCTC 957178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631936636800