Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7 109 5e-19 seq1 89.7 4e-13 >seq7 Length=1004146 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| |||| || || || ||| | | Sbjct 973440 ATGCAGATCTTCGTCAAGACGCTCACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 973499 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| || ||||| || || Sbjct 973500 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATACCACCTGACCAG 973559 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||||||| | ||||| | | || | ||||| |||||| Sbjct 973560 CAGCGACTCATCTTCGCCGGCAAACAGCTCGAGGACGGCAGAACTCTGTCCGACTACAAC 973619 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | || | ||| |||| |||| || ||| Sbjct 973620 ATCCAGAAGGAGTCGACCTTGCACCTGGTTCTGCGTCTGCGAGGTGGT 973667 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 22240 TTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAA 22299 || || || || || |||| || || ||||| | | || ||| | ||| || |||| Sbjct 973743 TTGACAGGAAAGACCATCACCCTGGAGGTGGAGTCTTCGGACACCATTGACAATGTCAAG 973802 Query 22300 CAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGC 22359 || ||||| ||||||||||| ||||| || || || ||||| || || || || || Sbjct 973803 TCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAACGACTGATCTTCGCTGGT 973862 Query 22360 AAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATA 22419 |||||| | |||||| || ||| | ||||| |||||||| || || || || || | Sbjct 973863 AAACAGCTTGAGGATGGACGAACCTTGTCCGACTACAACATCCAGAAGGAGTCTACTCTC 973922 Query 22420 CATTTAGTTTTGCGATTGCGCGGAGGT 22446 || | ||| | ||| | || || ||| Sbjct 973923 CACCTTGTTCTCCGACTCCGAGGTGGT 973949 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| ||||| |||| || || || || || | || || | ||| || ||||| Sbjct 974027 ACCGGCAAAACCATCACGCTGGAGGTCGAGTCCTCTGACACGATCGACAATGTCAAATCG 974086 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| |||||||| || |||||||| || || || || || Sbjct 974087 AAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAACGTCTCATCTTCGCTGGAAAG 974146 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| || ||| | ||| |||||||| || || || || || Sbjct 974147 CAGCTGGAGGACGGTCGAACCCTGAGCGACTACAACATCCAGAAGGAGTCGAC 974199 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 22240 TTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAA 22299 || ||||| || || |||| ||||| || || | |||| || | ||| | |||| Sbjct 972613 TTGACCGGAAAGACAATCACCCTTGAGGTCGAGTCTTCCGACACTATCGACAACGTCAAG 972672 Query 22300 CAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGC 22359 || ||||| |||||||||||||| || ||||| || || || ||||| |||||||| Sbjct 972673 TCCAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGACTTATCTTTGCCGGA 972732 Query 22360 AAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 || ||| | |||||| ||| ||| | || || |||| Sbjct 972733 AAGCAGCTTGAGGATGGCCGAACCCTTTCTGACTACA 972769 >seq1 Length=8012737 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || ||||| |||| ||||| || || | | || ||| | ||| | |||| Sbjct 2303665 ACGGGCAAAACCATCACCCTTGAGGTCGAGTCTTCGGACACCATCGACAACGTCAAGTCC 2303606 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| ||||| || || || || || || || ||||| ||| Sbjct 2303605 AAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGCGACTCATCTTCGCCGGTAAA 2303546 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | |||||| || || | ||||| |||||||| || || || || ||| | || Sbjct 2303545 CAACTCGAGGATGGTCGAACTCTGTCCGACTACAACATCCAGAAGGAGTCTACCCTCCAC 2303486 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | |||||| | || ||| Sbjct 2303485 CTCGTCCTTCGATTGAGAGGTGGT 2303462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727959076520