Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7 96.9 3e-15 seq1 93.3 4e-14 >seq7 Length=1004146 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || |||| | ||| | || | ||||| || || || |||||||| ||| Sbjct 973951 ATACCACCTCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCG 973892 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| ||||| |||||||||||| |||| || || || ||||| || Sbjct 973891 GACAAGGTTCGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGG 973832 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | |||| |||||| | || || Sbjct 973831 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCC 973772 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || |||| ||| | || || || |||| Sbjct 973771 ACCTCCAGGGTGATGGTCTTTCCTGTCA 973744 Score = 89.7 bits (98), Expect = 4e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||||||| || ||| || || || || || ||| Sbjct 974199 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGACCGTCCTCCAGCTGCTTTCCA 974140 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||| || ||||| || || || || || ||||| ||||| ||| Sbjct 974139 GCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTCGATTTG 974080 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGA 114362 | | || | ||||| | ||| ||||| |||| || | ||||||||||| ||| Sbjct 974079 ACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATGGTTTTGCCGGTGAGA 974023 >seq1 Length=8012737 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||| || ||| ||| ||| || ||||||||||| Sbjct 2303493 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCATCCTCGAGTTGTTTACCG 2303552 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||| || || || || || ||||| ||||| || Sbjct 2303553 GCGAAGATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 2303612 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAG 114361 | | || | |||||| | || ||||| || | ||| | |||||||| || || Sbjct 2303613 ACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTTTTGCCCGTGAG 2303668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134359036896