Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5 228 1e-54 seq7 134 2e-26 seq1 107 2e-18 >seq5 Length=1773785 Score = 228 bits (252), Expect = 1e-54 Identities = 834/1297 (64%), Gaps = 33/1297 (3%) Strand=Plus/Minus Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162 |||||| || || || || | || || ||| |||||||||||| | |||||||| Sbjct 910364 CCACATGTCGAATTGCAGCTTGCCCTGCGAGATTGGCGATCCCTCGTACGTCTCGTACTT 910305 Query 114163 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAA 114222 ||| || ||| |||| ||| | || ||||| || ||||| || || ||||| || Sbjct 910304 GCCGTCCTTCTCAGCCATCTCGCACGAGGCTTCGAGTGCGGCGTGGTAGATGGTCTCGAA 910245 Query 114223 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA--TCAAACGCGAGTCGGCACAAAATA 114280 || || || | || | | | |||| ||||| | |||||| || Sbjct 910244 GATCTGAATGTTGA--GCTCTCGAGCGGCCGGAGAGTCAAAGGGCAGTCGGAGAGCCATG 910187 Query 114281 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTT 114340 || | || |||||||||||||||||||| || | || | |||| ||| || ||| || Sbjct 910186 AACGCGTCGGCGAGACCTTGGACACCGAGTCCGACGGGTCTGTGTCGCATGTTGGACGTT 910127 Query 114341 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 114400 || | ||||| || | || | | ||| ||| | || || |||||||| Sbjct 910126 TTGGCCTCTTTGACGGGGTAGTAGTTTCGAGAGATGACCTGGTCGAGGTTCTTGGTGACG 910067 Query 114401 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT--GACAT 114458 || || ||||| || |||||||| | | | || | ||| || | ||| |||| Sbjct 910066 ACTTTGGTGATCTCGTGAAGCTTCTTGAAGTCGTAGACGCG--TCGTTCCATGTCGACAA 910009 Query 114459 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACT 114518 || || || |||| || || || || || || | | ||| || || ||||| Sbjct 910008 ACGCGGGGAGTGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTCGGGGGAAGAGTACT 909949 Query 114519 CTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT 114578 | || || || || |||| || || ||| || ||||| | || | || || |||| Sbjct 909948 CGATGATCTCAGTGCACAGGTTGGAGGACTTGATCGTGCCGAGGTGTTGCTGGTTAGACT 909889 Query 114579 TTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGA 114638 | | ||| || || ||||| ||||||||||| || || ||||| || |||| || || Sbjct 909888 TGGCGTTGGCGGCGTCTTTGTAGAGCATGTATGGGGTACCAGTCTCGGTCTGGGCCTCGA 909829 Query 114639 GAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC---- 114693 |||| || ||||| | | ||| | | ||| || ||| |||| | Sbjct 909828 GAATGGCGAACCAGAGCTTTTGCGCTTTGA----TGGTCTT---TCGTCCCTTTCCAGCA 909776 Query 114694 --CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 114751 |||||| |||||| ||||||||| | | | | || | ||| || || Sbjct 909775 CGCTCGTAGCCCTCGTAGAGCTTTTCAAACTCGGCGCTGTGGACATCGGCGAGGCCGGG- 909717 Query 114752 GCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAG 114810 || || ||| || | ||| | ||| | |||| || ||| || ||||||||||| || Sbjct 909716 GCATTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTTCATGAACAG 909657 Query 114811 GTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 114870 || ||||||||||| || |||||||||| || ||| ||||||| | || || || Sbjct 909656 ATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTTACCGTGGTT 909597 Query 114871 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 114930 | | || | ||||| | || || |||||||| || || ||||| | |||| Sbjct 909596 CTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 909537 Query 114931 TGACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATAC 114984 | || | | || ||| |||||| ||||| | || ||||| | || | Sbjct 909536 CGCACC---AGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTCGTATGC 909480 Query 114985 GCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 115044 | |||||||||| |||||| | || | || || || || ||| || || Sbjct 909479 CCTTAGCATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTT 909420 Query 115045 GGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 115104 ||||| || | || ||||| | ||| ||||| || || ||| ||||| || ||||| Sbjct 909419 GGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCA 909360 Query 115105 CTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCA 115164 | |||| | ||||||| |||||||||||||| | | |||| ||||| || Sbjct 909359 GGTCTTGAGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAGGAAACA 909300 Query 115165 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 |||||||| || | |||||||| | |||||| | ||||| | |||||| | || Sbjct 909299 CGAGGACATTTGGGGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAA 909240 Query 115225 CATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAAT 115284 | | |||||| | ||||||||| | ||| | ||||| | ||||| || Sbjct 909239 GTATCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCGTGGAT 909180 Query 115285 ACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCT 115344 ||||| | ||| ||||||| ||||| || ||| ||| | | | || | || || Sbjct 909179 ACCGACGGCGACACGCATAATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATTCT 909120 Query 115345 CTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAA 115381 | |||||| | ||| | |||||||| ||| ||| Sbjct 909119 CAAGAGGTAGGACCGCTCTAGGGTCTTGAAACCGAAA 909083 >seq7 Length=1004146 Score = 134 bits (148), Expect = 2e-26 Identities = 179/245 (73%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||||||||||||||| | ||||| | || ||||||||| ||||| Sbjct 957026 GGCAAAGTCGGTGTGGAGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAGTCC 957085 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| ||||||||||||||||| |||| || ||||| ||||||||||| Sbjct 957086 GGGCATGAGACCTCGCTTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAAGAT 957145 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCA- 126223 ||||| || || || || | || |||||||| |||| | || | || | Sbjct 957146 ACCCTCGACGGCGGCAAAGGCGATCAGTCGCTCAGCGAAAGTCGATCG--GTCGTCCGAG 957203 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | |||||| | ||||| | |||||||||| ||| || |||| ||| | ||| || || Sbjct 957204 ATCCACTTGAGGGCCCAGTTGGCCTTTTTCTGGATGCAGGGGATGGTGTCGATAGCCTCG 957263 Query 126284 AAGAG 126288 || || Sbjct 957264 AACAG 957268 >seq1 Length=8012737 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| | | ||| | ||||| ||||| ||| || ||||||||||||| |||| Sbjct 7388652 CCCTCGTCCCTGCTGATCAACTCATTGGAGAAAGTCAGGCCGGGCATGAGACCCCTCTTC 7388711 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 ||||||||||| || || ||| || || ||||||||||||||||| || || ||||| Sbjct 7388712 TTCAACCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATTCCCTCGACGCAAGCGAAA 7388771 Query 126185 GCAA 126188 |||| Sbjct 7388772 GCAA 7388775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353540264640