Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7 129 6e-25 seq1 109 5e-19 >seq7 Length=1004146 Score = 129 bits (142), Expect = 6e-25 Identities = 342/514 (67%), Gaps = 25/514 (5%) Strand=Plus/Minus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118 |||| | ||| |||||| | | | ||||||| | |||||| | |||| || ||| Sbjct 957255 TCGACACCATCCCCTGCATCCAGAAAAAGGCCAACTGGGCCCTCAAGTGGATCTCGGACG 957196 Query 47119 AAAACG-TC-ACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTT 47176 | || || ||| | || || || ||||||| || ||| ||||||||| ||||||| Sbjct 957195 AC--CGATCGACTTTCGCTGAGCGACTGATCGCCTTTGCCGCCGTCGAGGGTATCTTCTT 957138 Query 47177 CTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCAC 47236 ||| || || || |||| || | |||| | ||| | |||||||| ||||| Sbjct 957137 CTCTGGTTCTTTCGCCTCGATCTTCTGGTTGAAGAAGCGAGGTCTCATGCCCGGACTCAC 957078 Query 47237 GTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTA 47296 || |||||| | |||||||| ||||| || || |||||| |||||||||||||| Sbjct 957077 CTTCTCGAACGAGTTGATCTCGAGGGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCT 957018 Query 47297 CTACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACC--GTCA---GCGACATGTTT 47351 || || | | ||| |||| |||||| | || ||| | | | Sbjct 957017 CTTCA--CCCACCTCCGA---------CGACGACCCCACCCAGACACTGTCGAGAGGATC 956969 Query 47352 GCC---GAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTA 47408 | || |||||| || ||| ||||| || |||| |||||||| | || | Sbjct 956968 ATCAAAGAGGCCGTCAAGATCGAGCAAGAGTTCCTCACCGACGCTCTGCCAGTCTCGCTC 956909 Query 47409 GTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTC 47468 | ||||||||| | || | ||| | |||||||||| |||||||||||||| ||||| Sbjct 956908 ATTGGAATGAACTCTAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGACTGCTT 956849 Query 47469 GTTCAGCTAAAGTATC-CCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAA 47527 | || | ||| | |||| | | || || || ||||| |||||| | | Sbjct 956848 G-TCGCCCTTGGTAACGACAAGGTGTGGAACGTGTCCAACCCCTTCGACTTTATGGAGAT 956790 Query 47528 CATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 || |||||| |||||||| ||||||| |||||| Sbjct 956789 GATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAG 956756 Score = 122 bits (134), Expect = 8e-23 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| ||| |||||||||||||||| || ||||| || ||||||||| Sbjct 973029 TCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTTG 972970 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||||| | |||| ||||||| | |||||| |||| ||| | Sbjct 972969 TCCTGGATCTTGGACTTGACATTGTCGATTGTGTCCGAAGACTCGACCTCGAGGGTGATG 972910 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || || || || ||||| |||||||| Sbjct 972909 GTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 972875 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||| || | || ||||| || || || ||||| ||| | Sbjct 973666 CCACCTCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 973607 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || |||||||| || ||| |||| | ||||||||| || || ||| Sbjct 973606 AGAGTTCTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGT 973547 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || || ||||| |||| |||| |||||||| | ||||| Sbjct 973546 ATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTG-TCGATGGTGTCCGAAGATTCGAC 973488 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| || ||||| || || || || || |||||||| Sbjct 973487 CTCGAGCGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCAT 973440 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| ||| || || || ||| || |||||||| ||| Sbjct 973918 GTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTTCGTCCATCCTCAAGCTGTTTACCA 973859 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| ||| ||||| || || || ||||||||||||||| || ||| |||| Sbjct 973858 GCGAAGATCAGTCGTTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 973799 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091 | | || | |||||||| | ||| || || | ||| | || || || |||| Sbjct 973798 ACATTGTCAATGGTGTCCGAAGACTCCACCTCCAGGGTGATGGTCTTTCCTGTCA 973744 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | | ||| | ||||| || | || ||||| || || || ||||| |||| | Sbjct 974229 CCACCTCTGAGTCGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 974170 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || ||||| ||||||||| |||| | || ||||| ||||| || Sbjct 974169 AGGGTTCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGG 974110 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| ||| |||| | |||| ||||| | |||||| Sbjct 974109 ATACCCTCCTTGTCCTGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACC 974050 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGA 127093 || | || | ||||||||||| ||| Sbjct 974049 TCCAGCGTGATGGTTTTGCCGGTGAGA 974023 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| || ||| |||| | ||||||||| || || || || ||||||||| Sbjct 973307 TCCTCCAGCTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGAATTCCCTCCTTG 973248 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||| | | |||| ||||||| | |||||| || | || | | Sbjct 973247 TCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCCGAAGACTCGACCTCCAAAGTAATC 973188 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || || || || |||||||| Sbjct 973187 GTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCAT 973153 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| ||||| || |||| | ||||||||| |||||||| || |||||||| Sbjct 972747 ATCCTCAAGCTGCTTTCCGGCAAAGATAAGTCGCTGCTGGTCGGGAGGGATACCCTCCTT 972688 Query 127018 GTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 |||| || || ||||| |||| |||| ||||| | | |||||| || | ||| | Sbjct 972687 GTCCTGAATCTTGGACTTGACGTTG-TCGATAGTGTCGGAAGACTCGACCTCAAGGGTGA 972629 Query 127077 CCGTTTTGCCGGTCA 127091 || || ||||||| Sbjct 972628 TTGTCTTTCCGGTCA 972614 >seq1 Length=8012737 Score = 109 bits (120), Expect = 5e-19 Identities = 132/177 (75%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| ||| || || ||| ||| || || ||||| || Sbjct 2303493 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCATCCTCGAGTTGTTTACCG 2303552 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | ||||||||| || || || || |||||||||||| ||| || |||| Sbjct 2303553 GCGAAGATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 2303612 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| |||||||| | |||||| || | ||| | |||||||| || || Sbjct 2303613 ACGTTG-TCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTTTTGCCCGTGAG 2303668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500752449920