Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5 140 5e-28 >seq5 Length=1773785 Score = 140 bits (154), Expect = 5e-28 Identities = 447/678 (66%), Gaps = 14/678 (2%) Strand=Plus/Minus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908 ||||||||||| ||||| | | |||| ||| || ||||| || || ||||| || Sbjct 910903 GTGAACTGAATCGCGTTGGCAGACGGCCGCGTTCGGAGGTAGTAGATACCCGTCTTGAGT 910844 Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968 ||| || ||| ||||| | |||||| || | |||| | | | |||| || || | Sbjct 910843 CCCCGCTTCCAGCCGTAAAAGTGCATCGAGGTGAGTTGAGAGAAGCTCGGGTTGGACAGG 910784 Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028 || || || ||| ||| || ||||||||||||| | || || ||||| | | ||| Sbjct 910783 TGGATATTGAGACTCTGACTCTGGTCGATGAAAGCACCTCGGTCAGCGGCGAGGTCGATG 910724 Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGTGTTGAGGCAC 204087 | | ||| || || |||||||| || |||||| | | || || || || |||| Sbjct 910723 ACAGCCTTTTGGGAGATCTCCCAGACAGTCTTGTAGATCGCCT-TGAGGTCG-GAGGGG- 910667 Query 204088 ATCTTCCCAC-GTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCC 204145 |||| | || ||| || || || |||| || | || || | | || Sbjct 910666 ATCTGAGGAATGTTCTGGATGGAACCACCAGCGGCGATGATGAGGTTCTTCATGTTGTCG 910607 Query 204146 CCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCT 204205 ||| | ||||| |||||| || |||| || ||| | || ||| |||||| Sbjct 910606 TTCCAGAGACCCAAGTTGATCAAGTCTCGCAGGAGCCATGGGCAAACGACCTGGAAGTCT 910547 Query 204206 CCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTG 204265 || |||||||| | |||| | |||| | ||| |||| ||||| |||||| | Sbjct 910546 CCAGACAGCACTCGGCGGGCGTACAGCATCGACGTGTATGGCTCGAAGCACTCGTTCCAG 910487 Query 204266 CCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACA 204325 |||| |||||||| || ||||| ||||| || || | || || ||||| |||||| Sbjct 910486 CCGAGAATCTGAGACGTCGAAGCCGTTGGCATTGGGGCGACCAGGAGCGAGTTTCGCACA 910427 Query 204326 CCGTATTTTTGGACCCTGCGCTTCAGAGA--GGTCCAGTCGTGCATCGCACTGGGTTTCA 204383 |||| || | | ||| ||| ||| ||||||||| | | ||||| | Sbjct 910426 CCGTGCTTGGCAATCTTGC--TTCGGAGCTCGGTCCAGTCCCAGAGGTCGGTGGGTA-CT 910370 Query 204384 CG-CCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGA 204442 || |||||||||||||| || | |||| || || ||| |||| ||||||| Sbjct 910369 CGACCCCACATGTCGAATTGCAGCTTGCCCTGCGAGATTGGCGATCCCTCGTACGTCTCG 910310 Query 204443 TA-AGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGT 204501 || || | |||| || |||| || ||||||||| | | ||| | ||| ||||| Sbjct 910309 TACTTGCCG-TCCTTCTCAGCCATCTCGCACGAGGCTTCGAGTGCGGCGTGGTAGATGGT 910251 Query 204502 CTCAAAGATCTGAACGTT 204519 ||| |||||||||| ||| Sbjct 910250 CTCGAAGATCTGAATGTT 910233 Score = 102 bits (112), Expect = 1e-16 Identities = 391/605 (65%), Gaps = 18/605 (3%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| ||||| ||| |||||| ||| |||| || ||||| || || | || | | || Sbjct 909668 CTTCATGAACAGATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTC 909609 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || |||||||| | | ||| || ||| || | | |||||||||||| ||||| | Sbjct 909608 TTTACCGTGGTTCTTTCTTAGGTCGAGG-AAGTCGAAGACGTCGGCGTGCCATGGCTCGA 909550 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | ||| | || || || | |||||| ||||||||||| || || | | | | Sbjct 909549 GGTAGATGGCGAACGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGG 909490 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGG 205403 ||| | | | | ||||| || || | |||||||| | ||||| || | | ||| Sbjct 909489 CGTCGTATGCCCTTAGCATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGT 909430 Query 205404 CCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGA 205463 || || | || | | |||| ||| || || || || | | ||||| || Sbjct 909429 AGGAACCCTTGGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGA 909370 Query 205464 TCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC 205522 |||||||||| ||||| || || |||||| || |||| || ||||| || | Sbjct 909369 TCTGGGCGCAGGTCTTG-AGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCG 909311 Query 205523 ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTG---GTGCCCGCGTGGAAGAGCGTGGGG 205579 || || | ||||| | || |||| |||| || |||| || ||| | || || Sbjct 909310 ACGAGGAAACACGAGGACA-TTTGG--GGGTTGGGTGTACCCGAGTTGAACAATGTTGGC 909254 Query 205580 CTGGCGTGGCTGAAGCGCTTCTCGCTCAAACA----CCTGTAGGTCTCCAGCACGCTCTC 205635 ||||||| | ||| | |||||| ||| |||||||||| || || | || Sbjct 909253 GAGGCGTGGGTAAAG----TATCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTC 909198 Query 205636 CAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCAT 205695 | | | ||||| ||||| | ||||| | ||| | | ||| ||||||| || | Sbjct 909197 AATGTTGGCACCGTGGATACCGACGGCGACACGCATAATCATGTGCTGAGGTCGTTCGAC 909138 Query 205696 CACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTT 205755 | | | |||| | | | || |||| | ||||||||| || | |||||||| Sbjct 909137 GATCTTGCCGTTGATTCTCAAGAGGTAGGACCGCTCTAGGGTCTTGAAACCGAAAAAGTT 909078 Query 205756 GAAGG 205760 | ||| Sbjct 909077 GTAGG 909073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155120484480