Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7 143 6e-29 seq1 120 7e-22 >seq7 Length=1004146 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | ||| || ||||| | ||||||||||| |||| ||||||||| | || ||| Sbjct 973661 TCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 973602 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 || || || || ||||| || |||||||||||||| ||||||||||| || || || Sbjct 973601 TCTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGTATGCC 973542 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||||||||| ||| ||| |||| |||||| | | ||| || || | Sbjct 973541 CTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGACCTCGAG 973482 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||||||| || ||||| || || || || || || Sbjct 973481 CGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTG 973443 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| |||| || |||||||||||||| |||||||| |||| ||||||||| | ||| || Sbjct 973943 TCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGT 973884 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||| || ||||| || || |||||||| || || |||||||| || ||| || Sbjct 973883 TCGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGGGGAATGCC 973824 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || ||||||||||| ||| || || | |||||| | | || || |||| Sbjct 973823 CTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAG 973764 Query 199588 CGTGATCGTCTTACCCGT 199605 ||||| ||||| || || Sbjct 973763 GGTGATGGTCTTTCCTGT 973746 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| ||||| | ||| |||||||||||||| |||| ||||||||| || || | Sbjct 974220 AGTCGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGA 974161 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || || |||||||||||||| |||||||||||||| |||||||| || || || || Sbjct 974160 CCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCC 974101 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| || || |||| ||||| | | || || |||| |||| Sbjct 974100 TTGTCCTGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTG 974041 Query 199592 ATCGTCTTACCCGTGAGA 199609 || || || || |||||| Sbjct 974040 ATGGTTTTGCCGGTGAGA 974023 Score = 100 bits (110), Expect = 7e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511 ||||||| | | ||| || || || |||||||| || |||||||||||||| ||||||| Sbjct 973330 TGTAGTCCGAAAGAGTTCTGCCGTCCTCCAGCTGTTTACCGGCGAAGATGAGTCGCTGCT 973271 Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571 |||| || |||||| || ||||| ||||| |||||| |||| ||||| | Sbjct 973270 GGTCAGGTGGAATTCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCCG 973211 Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || ||||| || |||||||| || || || || || || || || || Sbjct 973210 AAGACTCGACCTCCAAAGTAATCGTCTTTCCAGTAAGGGTCTTGACGAAGATCTG 973156 Score = 89.7 bits (98), Expect = 1e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| |||||||| || || ||| | || |||||| | || ||| |||| |||||| |||| Sbjct 973847 ACTGATCTTCGCTGGTAAACAGCTTGAGGATGGACGAACCTTGTCCGACTACAACATCCA 973906 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 201030 ||| ||||||||||| ||||||||| | |||| ||| Sbjct 973907 GAAGGAGTCTACTCTCCACCTTGTTCTCCGACTCCGA 973943 >seq1 Length=8012737 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||||| |||| ||||||||| | || ||| | ||||| Sbjct 2303478 AGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCATCC 2303537 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || |||||||||||||| ||||||||||| || || || || ||| Sbjct 2303538 TCGAGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 2303597 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| || Sbjct 2303598 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTT 2303657 Query 199598 TTACCCGTGAG 199608 || |||||||| Sbjct 2303658 TTGCCCGTGAG 2303668 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| |||| ||| || |||||||||||||| ||||||||||| || ||| || || Sbjct 963598 CCATCCTCCAACTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGAATACCCTCC 963539 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| ||| |||| ||||| | | || || || | ||| Sbjct 963538 TTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTG 963479 Query 199592 ATCGTCTTACCCGTGAG 199608 || |||||||||||||| Sbjct 963478 ATGGTCTTACCCGTGAG 963462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921479160536