Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7 178 3e-39 seq1 131 4e-25 >seq7 Length=1004146 Score = 178 bits (196), Expect = 3e-39 Identities = 162/202 (80%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 || ||||| | ||||||||| ||||| ||||| || || || ||||| |||| |||| | Sbjct 973943 TCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAG-G 973885 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||| ||||| || ||||| ||||| |||||||| |||||||| ||||| || ||||||| Sbjct 973884 TTCGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGGGGAATGC 973825 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 | || ||||| ||||| || |||||| || ||||||||||||||| ||||| || | Sbjct 973824 CCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCA 973765 Query 195098 GGGTAACCGTCTTTCCTGTCAA 195119 |||| | |||||||||||||| Sbjct 973764 GGGTGATGGTCTTTCCTGTCAA 973743 Score = 156 bits (172), Expect = 9e-33 Identities = 163/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| ||||| | || ||||| || || || ||||| |||| |||||||| || || Sbjct 973652 CAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCTGCCGTC 973593 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 |||||||| || || |||||||| ||||| || ||||| || || ||||| || ||||| Sbjct 973592 CTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGTATGCCCTCCTTGTC 973533 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||| || ||||||||| || |||||||||||| ||| || || || || | ||| Sbjct 973532 CTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGACCTCGAGCGTGATCGT 973473 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 |||||| || | || || ||||| | |||||| Sbjct 973472 CTTTCCGGTGAGCGTCTTGACGAAGATCTGCATT 973439 Score = 122 bits (134), Expect = 2e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 194963 TGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTT 195022 |||| || | ||| |||| ||||| || |||||||| || || ||||||||||| || | Sbjct 972769 TGTAGTCAGAAAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGTCGCTGCT 972710 Query 195023 GGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCG 195082 |||| ||||| || || || ||||| ||||| || ||||||||| || || ||||| | Sbjct 972709 GGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGG 972650 Query 195083 AACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAA 195119 || || || |||||||| | |||||||| ||||| Sbjct 972649 AAGACTCGACCTCAAGGGTGATTGTCTTTCCGGTCAA 972613 >seq1 Length=8012737 Score = 131 bits (144), Expect = 4e-25 Identities = 131/170 (77%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| |||| ||||||| ||||| ||| Sbjct 2303481 ACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCATCCTCG 2303540 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || ||||| |||||||| ||||| || ||||| || || || || || ||||| || Sbjct 2303541 AGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGG 2303600 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || ||||||||| || |||||||||||| || || |||||||| Sbjct 2303601 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGT 2303650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481486278136