Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7 109 4e-19 seq1 82.4 5e-11 >seq7 Length=1004146 Score = 109 bits (120), Expect = 4e-19 Identities = 135/181 (75%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 |||||||| ||| |||| | || |||||||| |||||||| || || | ||| |||||| Sbjct 973050 TAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG 972991 Query 34866 TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCAC 34923 || | || | ||||||||||| ||||| ||||| || | ||||| | | Sbjct 972990 TCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT--TGTCGATTGTGTC 972935 Query 34924 CG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| || |||| ||| |||||||| || ||||| ||||| |||||||||||||| Sbjct 972934 CGAAGACTCGACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 972875 Query 34982 A 34982 | Sbjct 972874 A 972874 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || ||| | || || |||||||| ||||| || Sbjct 973630 TCCTTCTGGATGTTGTAGTCGGACAGAGTTCTGCCGTCCTCGAGCTGTTTGCCGGCGAAG 973571 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | ||||||||||| |||||| ||||| Sbjct 973570 ATGAGTCGCTGCTGGTCAGGTGGTATGCCCTCCTTGTCCTGAATCTTGCTCTTGAC---- 973515 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| | || || |||| || || || ||||| ||||| ||||| Sbjct 973514 GTTGTCGATGGTGTCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCGGTGAGCGTCTT 973455 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 973454 GACGAAGATCTGCAT 973440 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| ||||| ||| |||| | || ||| Sbjct 974211 ACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGACCGTCCTCC 974152 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || ||||||||||| | || | ||||||||||| Sbjct 974151 AGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGG 974092 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | |||| ||| || ||| || || | || |||||||| Sbjct 974091 ATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATGGTTTTG 974032 Query 34953 CCCGTGAGA 34961 || |||||| Sbjct 974031 CCGGTGAGA 974023 Score = 87.8 bits (96), Expect = 1e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || | | ||||| |||| || |||||||| || || || Sbjct 973912 TCCTTCTGGATGTTGTAGTCGGACAAGGTTCGTCCATCCTCAAGCTGTTTACCAGCGAAG 973853 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGAC 34906 || |||||||||||||| | || | ||||||||||| ||||||| ||||| Sbjct 973852 ATCAGTCGTTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGAC 973797 >seq1 Length=8012737 Score = 82.4 bits (90), Expect = 5e-11 Identities = 124/174 (71%), Gaps = 8/174 (5%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || |||| |||| || || ||||| ||||| || Sbjct 2303499 TCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCATCCTCGAGTTGTTTACCGGCGAAG 2303558 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | ||||||||||| ||||| ||||| Sbjct 2303559 ATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC---- 2303614 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 | | ||||| | ||| | ||| || || | ||| |||||||| |||||||| Sbjct 2303615 GTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTTTTGCCCGTGAG 2303668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633568348224