Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq3 136 3e-27 >seq3 Length=2284511 Score = 136 bits (150), Expect = 3e-27 Identities = 244/349 (70%), Gaps = 8/349 (2%) Strand=Plus/Minus Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100 |||| |||||||| |||| | || || | || || ||||||||| |||| || Sbjct 1792834 CTTTCGGGTTCCATGCGCTAAGGACTATTCTCCGATCCGTGGGGTTGTTCTTGATCTTGT 1792775 Query 30101 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTC--ATGTCCGT 30158 | | | | | ||| | ||||| || || | || ||||| || |||| | |||| Sbjct 1792774 CAATGACCTCTTGTAATTGATCTACTCCTTTTCCATGGTAGT-TGTCCTCGCAAGTCCC- 1792717 Query 30159 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30218 |||||||||||| || |||||||| ||||| || ||||||||||| ||||| || || | Sbjct 1792716 GTACTCTGCTCCAAAGTGCCTCCATTGGAATCCATACACCGGTCCAAGGTCACCTTC--C 1792659 Query 30219 CCTGTGCTCGA-AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30276 | | || || |||||| | |||||||| | ||||| || || || | |||||||| Sbjct 1792658 CGTCTGTGAGATAGCCCCACTTTGTCCAAGTACTCTCTCGAGCCATTCCCTTCCCAGATA 1792599 Query 30277 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30336 || || ||||||||| | | ||| || ||| | || ||||| ||||| |||||| Sbjct 1792598 TTCACGCCCTTCTCGCTCAATTTCTTGCCGTCGGTGCAGCCGCTGACAAACCATAGCAGC 1792539 Query 30337 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385 || || | ||| || || || | |||||| ||||| || |||| Sbjct 1792538 TCTTCGATGACACCCCGTGTGAATACTCGCTTGGTAGTGAGTAGAGGAA 1792490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617560159784