Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5 297 4e-75 seq7 188 1e-42 seq1 86.0 1e-11 >seq5 Length=1773785 Score = 297 bits (328), Expect = 4e-75 Identities = 943/1441 (65%), Gaps = 51/1441 (4%) Strand=Plus/Minus Query 212705 CTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGA 212764 |||||||||||| ||||| | | | ||||||||| | ||| |||| | | | ||||| Sbjct 910769 CTGACTCTGGTCGATGAAAGCACCTCGGTCAGCGGCGAGGTCGATGACAGCCTTTTGGGA 910710 Query 212765 GAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTG 212824 || |||||| || |||||| |||| | |||||||| |||| || |||||||| Sbjct 910709 GATCTCCCAGACAGTCTTGTAGATCGCCTTGAGGTCGGAGGGGATCTGAGGAATGTTCTG 910650 Query 212825 CACAGACCC-CCTGTGT--ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCT 212881 | || || || | | ||| | || | | ||||| ||||||||||| ||| Sbjct 910649 GATGGAACCACCAGCGGCGATGATGAGGTTCTT---CATGTTGTCGTTCCAGAGACCCAA 910593 Query 212882 GGTCTCCAGGCACTTGACCAGGTGA---GGGTTGACTATCTGGAAGTCACCTGAGAGCAC 212938 | | || | || | |||| | ||| || | ||||||||| || || ||||| Sbjct 910592 GTTGATCAAGT-CTCG--CAGGAGCCATGGGCAAACGACCTGGAAGTCTCCAGACAGCAC 910536 Query 212939 CCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTG 212998 | | ||| | | || ||||| ||||||| || |||||| || |||||||| Sbjct 910535 TCGGCGGGCGTACAGCATCGACGTGTATGGCTCGAAGCACTCGTTCCAGCCGAGAATCTG 910476 Query 212999 TGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCC 213058 | || || || ||||| || || |||||||| ||| | ||| ||||||| | | Sbjct 910475 AGACGTCGAAGCCGTTGGCATTGGGGCGACCAGGAGCGAGTTTCGCACACCGTGCTTGGC 910416 Query 213059 GATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTT 213118 || || || ||||| | ||||||||| | | | ||| |||| || Sbjct 910415 AATCTTGCTTCGGAGCTCGGTCCAGTCCCAGAGGTCGGTG-GGTACTCGACC-------- 910365 Query 213119 CCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGG 213178 ||||||||| || |||| |||| | | || |||| ||| | ||| Sbjct 910364 CCACATGTCGAATTGCAGCTTGCCCTGCGAGATTGGCGATCCCTCGTACGTCTCGTACTT 910305 Query 213179 GCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAA 213238 ||| | || || |||| |||||| || || | || || |||| ||||||||| || || Sbjct 910304 GCCGTCCTTCTCAGCCATCTCGCACGAGGCTTCGAGTGCGGCGTGGTAGATGGTCTCGAA 910245 Query 213239 TATCTCCCTGTTGAGCTTCTTG-GCCTCTGGGGACGTGAAGGGCA-TCATCATGCGTTGG 213296 |||| ||||||||| || | || | || || ||||||| || || || Sbjct 910244 GATCTGAATGTTGAGCT-CTCGAGCGGCCGGAGAGTCAAAGGGCAGTCGGAGAGCCATG- 910187 Query 213297 AACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG 213356 ||| | || || || || ||||| |||| |||| ||||||||||| || ||| ||| | Sbjct 910186 AACGCGTCGGCGAGACCTTGGACACCGAGTCCGACGGGTCTGTGTCGCATGTTGGACGTT 910127 Query 213357 GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCC 213416 | ||| | | |||||| |||| | ||||| || || |||||| |||| | Sbjct 910126 TTGGCCTCTTTGACGGGGTAGTAGTTTCGAGAGATGACCTGGTCGAGGTTCTTGGTGACG 910067 Query 213417 ACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCC--CGTCC----TGC 213470 |||||||||| | | || | || |||| ||||| | | ||| | | Sbjct 910066 ACTTTGGTGATCTCGTGAAGCTTCT------TGAAGTCGTAGACGCGTCGTTCCATGTCG 910013 Query 213471 ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTG 213530 |||||| | || || |||| | || |||||||| ||||| ||||| | | | | | Sbjct 910012 ACAAACGCGGGGAGTGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTCGGGGGAAGAG 909953 Query 213531 TACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTT 213590 ||||| |||||||| |||||||||||| | | ||| ||||| |||| || ||||| Sbjct 909952 TACTCGATGATCTCAGTGCACAGGTTGGAGGACTTGATCGTGCCGAGGTGTTGCTGGTTA 909893 Query 213591 GACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGAC 213650 ||||| |||||||| | || |||||||||||||| |||| || ||||| ||||| | Sbjct 909892 GACTTGGCGTTGGCGGCGTCTTTGTAGAGCATGTATGGGGTACCAGTCTCGGTCTGGGCC 909833 Query 213651 ACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTA 213710 | || || | |||||| | || |||| | | | ||| | | Sbjct 909832 TCGAGAATGGCGAACCAGAGCTTTTGCGCTTTGATGGTCTTTCGTCCCTTTCC---AGCA 909776 Query 213711 GCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA 213770 |||||| |||||||||| | || ||| || ||| | | || || || Sbjct 909775 CGCTCGTAGCCCTCGTAGAGCTTTTCAAACTCGGCGCTGTGGACATCGGCGAGGCCGGGG 909716 Query 213771 CAGGATGCGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAG 213829 || | ||| ||||||||| ||||||| || | | ||| ||||| || ||||||||| Sbjct 909715 CATTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTC-GACTCGCTTCATGAACAG 909657 Query 213830 GTCCGGGACCCACAGCGCGGTGAACAGGTC-CCTGGTCCTCCTCTCGTCCACTCCAGAGT 213888 || |||| ||| || ||| ||| || || | || || || || || || || Sbjct 909656 ATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACT-TCTTCTTTACCGTGGT 909598 Query 213889 TTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAA 213948 | || | || || || ||||| |||| ||| |||||||| ||||| | ||||||||| | Sbjct 909597 TCTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGA 909538 Query 213949 AGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGC 214005 | || || | || | ||||| |||||||| || | |||| || | |||| Sbjct 909537 ACGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTCG--TATGC 909480 Query 214006 GC--AGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGA 214063 | || | || || | |||||||| | |||||||| || || || || || || Sbjct 909479 CCTTAGCATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTT 909420 Query 214064 GGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 ||| | | |||| ||| ||| || || |||||||| |||||||||| |||||| Sbjct 909419 GGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCA 909360 Query 214124 G 214124 | Sbjct 909359 G 909359 >seq7 Length=1004146 Score = 188 bits (208), Expect = 1e-42 Identities = 364/529 (69%), Gaps = 11/529 (2%) Strand=Plus/Plus Query 47851 CACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAA 47910 |||||| ||| |||||||| | ||| |||| | |||||| ||||||| ||| ||| Sbjct 956747 CACTCTCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAA 956806 Query 47911 GGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCAGGTGATCCGCGA 47969 |||||||| ||| ||||| |||| ||| | || |||| | || |||| Sbjct 956807 GGGGTTGGACACGTTCCACACCT-TGTCGTTACCAAGGGCGACAAGCAGTCGGTCGGCGA 956865 Query 47970 CGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAG 48029 | |||||||||| | ||||||| | |||||| || ||||| || || |||| || Sbjct 956866 CAAACTCGATGTACTGGCACATGAGCTTAGAGTTCATTCCAATGAGCGAGACTGGCAGAG 956925 Query 48030 CCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGG 48089 | | ||||| ||||| | ||| |||| ||||| || | ||| || || | | Sbjct 956926 CGTCGGTGAGGAACTCTTGCTCGATCTTGACGGCCTCTTTGATGATCCTCTCGACA-GTG 956984 Query 48090 ACTCTGAGGGTTTGTTG-CGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGC 48148 || | ||| | || | || ||||| || |||| | ||||||||||| |||| Sbjct 956985 TCTGGGTGGGGTCGTCGTCGGAGGTGGGTGA---AGAGGAGACAGGCAAAGTCGGTGTGG 957041 Query 48149 AAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTC 48208 | || ||||||| ||| | | |||| |||||| ||| || ||||||| || | | Sbjct 957042 AGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAGTCCGGGCATGAGACCTCGC 957101 Query 48209 TGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCG 48268 | || | |||||| || | |||||||| |||||||||||||| ||||| || || || Sbjct 957102 TTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAAGATACCCTCGACGGCGGCA 957161 Query 48269 AACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTC--TTGTCTGAGATCCAGGAAAGCGCCC 48326 || ||| | || | ||| |||||| || || | ||| |||||||| || |||| Sbjct 957162 AAGGCGATCAGTCGCTCAGCGAAAG--TCGATCGGTCGTCCGAGATCCACTTGAGGGCCC 957219 Query 48327 AGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 ||| ||||| |||| |||||| || || || || || ||| ||| || Sbjct 957220 AGTTGGCCTTTTTCTGGATGCAGGGGATGGTGTCGATAGCCTCGAACAG 957268 >seq1 Length=8012737 Score = 86.0 bits (94), Expect = 1e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || ||||||| |||||| | | | |||||||| || || ||||||| ||||||| Sbjct 7388652 CCCTCGTCCCTGCTGATCAACTCATTGGAGAAAGTCAGGCCGGGCATGAGACCCCTCTTC 7388711 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCAC 48261 || | |||||| || || || || ||||||||||||||||| ||||| || Sbjct 7388712 TTCAACCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATTCCCTCGAC 7388761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532706846720