Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 246 6e-60 seq7 158 2e-33 seq1 104 4e-17 >seq5 Length=1773785 Score = 246 bits (272), Expect = 6e-60 Identities = 775/1182 (66%), Gaps = 59/1182 (5%) Strand=Plus/Minus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGC 221424 || ||||||| |||||| |||| | || ||| |||| || || || || || Sbjct 910324 CCCTCGTACGTCTCGTACTTGCCGTCCTTCTCAGCCATCTCGCACGAG-GCTTCGAGTGC 910266 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGA 221483 ||||||||||||||||| |||||| ||||||| |||| | || | ||||| | Sbjct 910265 GGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAG-CTCTCGAGCGGCCGGAGAGTCAA 910207 Query 221484 AGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542 |||||| || || | |||| | ||||||| || || || || |||| |||| ||| Sbjct 910206 AGGGCAGTCGGAGAGCCATGAACG-CGTCGGCGAGACCTTGGACACCGAGTCCGACGGGT 910148 Query 221543 CTGTGTCTCCTGTTGGAAGC---GGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 ||||||| | ||||||| | |||| ||| || ||||| || |||| ||| Sbjct 910147 CTGTGTCGCATGTTGGACGTTTTGGCCTCTT-TG--ACGGGGTAGTAGTTTCGAGAGATG 910091 Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAAC 221659 | | || ||||||| |||| |||||| | |||| ||||||| |||| Sbjct 910090 ACCTGGTCGAGGTTCTTGGTGACGACTTTGGTGATCTCGTGAAGCTTCT------TGAAG 910037 Query 221660 ACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719 | | ||| ||||| | || ||||| ||| || || | | || ||| Sbjct 910036 TCGTAGACGC----GTCGTTCCATG--TCGACAAACGCGGGGAGTGCGAGGGAAGCGAGG 909983 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || || ||||| |||||||| | | |||| |||||||| || || |||||| | Sbjct 909982 TTGCAGACGGCGACCTCGTCGGGGGAAGAGTACTCGATGATCTCAGTGCACAGGTTGGAG 909923 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 ||||||| || || ||||| | || ||||||||| ||||| ||||| ||||||||| Sbjct 909922 GACTTGATCGTGCCGAGGTGTTGCTGGTTAGACTTGGCGTTGGCGGCGTCTTTGTAGAGC 909863 Query 221840 ATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT------CT 221893 || | || |||||||| ||| ||| | ||||| | |||||| | || Sbjct 909862 ATGTATGGGGTACCAGTCTCGGTCTGGGCCTCGAGAATGGCGAACCAGAGCTTTTGCGCT 909803 Query 221894 CTGGCGCTCAC-CGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCAT 221952 || | || ||||| ||| | |||| |||| || || |||||| | Sbjct 909802 TTGATGGTCTTTCGTCC-CTTTCCAGCACGCTCG---------TAGCCCTCGTAGAGCTT 909753 Query 221953 GTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACT 222012 ||||||| | | || | ||| | ||||| || || || ||| ||||| || | Sbjct 909752 TTCAAACTCGGCGCTGTGGACATCGGCGAGGCCGGGGCATTCGGAGGGGCACATGAGGGT 909693 Query 222013 CCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAA 222072 ||||| | | ||| | || |||||| || || |||||||| || || | || Sbjct 909692 CCAGTCACCATCCGACTCGACTCGCTTCATGAACAGATCGGGGATCCAGAGGGCGTAGAA 909633 Query 222073 GAGATCTCTGGTCCG--CTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 |||||||| | || || || || || ||| ||| || || || || | || || Sbjct 909632 GAGATCTCGTGCTCGAACTTCTTCTTTAC--CGTGGTTCTTTCTTAGGTCGAGGAAGTCG 909575 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 || | ||| |||||||| ||||| || |||| ||| | || || ||||||||||||||| Sbjct 909574 AAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGGTCGCTTGTTGCCA 909515 Query 222191 CCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 ||||| || || | || |||| | | | || | || || | |||||| Sbjct 909514 CCCTGGTCGACATATCGGGCCGTGGCGTCGTATGCCCTTAGCATTGGAACGATACCGTTG 909455 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT---ACTG-GCAGA 222306 || ||||||||| || |||||| | ||| ||| | | ||| | || | ||| Sbjct 909454 GAGTAACCGTTGGTACCGGCAATGTAGGAACCCTTGGCTCGGATGTTGTGAATGTGGAGA 909395 Query 222307 CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 |||||||||||||| || |||||| ||||||| ||||||| || || ||| Sbjct 909394 ----CCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGCGTCTCGTAGAT 909339 Query 222367 GCCCTCCATAGAGTCCTC---CTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423 || || || ||||| || | || || | || ||||| || ||||| || | || Sbjct 909338 ACCGTCGATCGAGTCGTCTCGCATGGCG---ACGAGGAAACACGAGGACATTTGGGGGTT 909282 Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483 || | || | ||| |||| || || |||||| |||||||| | | ||||| || Sbjct 909281 GGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAAGTATCGCTCGGACATGAG 909222 Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 | ||| ||||| | ||||| | | |||||| | ||||| || Sbjct 909221 GTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCGTGGAT 909180 >seq7 Length=1004146 Score = 158 bits (174), Expect = 2e-33 Identities = 348/520 (67%), Gaps = 13/520 (3%) Strand=Plus/Minus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 ||||| | || ||||| ||| ||| ||||| ||| ||||| |||||| | ||| Sbjct 957268 CTGTTCGAGGCTATCGACACCATCCCCTGCATCCAGAAAAAGGCCAACTGGGCCCTCAAG 957209 Query 25846 TGGATCAACAGCCAGAGCGCT--ACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGG 25903 |||||| | | | || || | || || | ||||| ||| | |||||||| || || | Sbjct 957208 TGGATCT-CGGAC-GACCGATCGACTTTCGCTGAGCGACTGATCGCCTTTGCCGCCGTCG 957151 Query 25904 AGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCA 25963 |||| ||||| ||| ||||| || || | ||||||||| | ||| || || || Sbjct 957150 AGGGTATCTTCTTCTCTGGTTCTTTCGCCTCGATCTTCTGGTTGAAGAAGCGAGGTCTCA 957091 Query 25964 TGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATT 26023 ||||||| || ||| || |||||| | ||| ||||||||||||||||||| || | Sbjct 957090 TGCCCGGACTCACCTTCTCGAACGAGTTGATCTCGAGGGACGAGGGTCTCCACACCGACT 957031 Query 26024 TTGCCTGCCTGCTCTACACGGGCCACTTGC-TCCACAAACCTTCTCAAGAGACCGTCTAC 26082 ||||||| || |||| ||| |||| | | | || | || | | ||| || ||| | Sbjct 957030 TTGCCTGTCTCCTCTTCAC---CCACCTCCGACGACGACCCCAC-CCAGACACTGTCGAG 956975 Query 26083 AGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNN 26142 || |||||||||||||| || |||||||| | ||||| | Sbjct 956974 AGGATCATCAAAGAGGCCGTCAAGATCGAGCAAGAGTTCCTCACCGACGCTCTGCCAGTC 956915 Query 26143 NNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCAT 26202 | || |||||| | |||||| |||| ||||| |||| ||| ||||||| Sbjct 956914 TCGCTCATTGGAATGAACTCTAAGCTCATGTGCCAGTACATCGAGTTTGTCGCCGACCGA 956855 Query 26203 CTGC-TGT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTA 26260 |||| ||| ||| || || || || | | | | | ||||| |||||||||| Sbjct 956854 CTGCTTGTCGCC--CTTGGTAACGACAAGGTGTGGAACGTGTCCAACCCCTTCGACTTTA 956797 Query 26261 TGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 |||| | || ||| | | || ||| |||||||||| || Sbjct 956796 TGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 956757 >seq1 Length=8012737 Score = 104 bits (114), Expect = 4e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 ||| ||| | | ||||| || || ||| || ||||| ||||| ||| || || ||| Sbjct 7388791 TTTCGCGTGAGACTGGTTGCTTTCGCTTGCGTCGAGGGAATCTTCTTCTCTGGCTCCTTT 7388732 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988 || |||||||||||| | ||| ||| ||| ||||||||| ||| ||||| ||||| || Sbjct 7388731 GCCGCCATCTTCTGGTTGAAGAAGAGGGGTCTCATGCCCGGCCTG-ACTTTCTCCAATGA 7388673 Query 25989 GCTCATCAGCAGGGACGAGGG 26009 | | ||||||||||||||||| Sbjct 7388672 GTTGATCAGCAGGGACGAGGG 7388652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844707115520