Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 163 3e-35 seq7 122 1e-22 seq1 82.4 9e-11 >seq5 Length=1773785 Score = 163 bits (180), Expect = 3e-35 Identities = 669/1040 (64%), Gaps = 15/1040 (1%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| ||||| |||| |||||||| | ||||||| ||| Sbjct 909147 CCTCAGCACATGATTATGCGTGTCGCCGTCGGTATCCACGGTGCCAACATTGACCGAGTC 909206 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| ||| || |||||| | | || | ||||| | ||||| | ||| Sbjct 909207 CTCGAGACCTACAACCTCATGTCCGAGCGATACTTTACCCACGCCTCGCCAACATTGTTC 909266 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || | |||||||| | || || |||||| || ||||| |||||| || ||| Sbjct 909267 AACTCGGGTACACCCAACCCCCAAATGTCCTCGTGTTTCCTCGTCGCCATGCGAGACGAC 909326 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || ||| |||||||||| | || || | | || || || ||||| ||| || || Sbjct 909327 TCGATCGACGGTATCTACGAGACGCTCAAGACCTGCGCCCAGATCTCCAAGACTGCCGGT 909386 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 ||||| || | ||||| || | | ||||||| || ||| || || || Sbjct 909387 GGTATCGGTCTCCACATTCACAACATCCGAGCCAAGGGTTCCTACATTGCCGGTACCAAC 909446 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 ||| | || | ||||| |||||||||| | | || ||||||| || || ||||| Sbjct 909447 GGTTACTCCAACGGTATCGTTCCAATGCTAAGGGCATACGACGCCACGGCCCGATATGTC 909506 Query 75572 AATCAAGCGGGGCGTC--GCAAGG-GGTCCAT-CGCGGTCTACTTGGAACCATGGCATGC 75627 | || | | ||| | || | ||| | | ||| ||||| | || |||||||| || Sbjct 909507 GACCAGG-GTGGCAACAAGCGACCTGGTGCGTTCGCCATCTACCTCGAGCCATGGCACGC 909565 Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAG 75687 ||| || | || ||||| || || || ||||| ||| | ||||| | ||| | Sbjct 909566 CGACGTCTTCGACTTCCTCGACCTAAGAAAGAACCACGGTAAAGAAGAAGTTCGAGCACG 909625 Query 75688 AGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGG 75747 ||||||||| | |||| ||||| || || || ||||||||||| || ||| || ||| Sbjct 909626 AGATCTCTTCTACGCCCTCTGGATCCCCGATCTGTTCATGAAGCGAGTCGAGTCGGATGG 909685 Query 75748 TCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 | | ||| | || | || || | || || || || ||| |||| | | | | Sbjct 909686 TGACTGGACCCTCATGTGCCCCTCCGAATGC-CCCGGCCTCGCCGATGTCCACAGCGCCG 909744 Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 |||||||| |||||| || || | | || || | | | ||| | | | Sbjct 909745 AGTTTGAAAAGCTCTACGAGGGCTACGAGCGTGCTGGAAAGGGACGA-AAGACCAT-CAA 909802 Query 75866 GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 ||| | | | ||| || |||||| | | ||||| |||||||| || ||||| || Sbjct 909803 AGCGCAAAAGCTCTGGTTCGCCATTCTCGAGGCCCAGACCGAGACTGGTACCCCATACAT 909862 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 ||| ||||| || || ||| ||| |||||| | | | || || |||||| Sbjct 909863 GCTCTACAAAGACGCCGCCAACGCCAAGTCTAACCAGCAACACCTCGGCACGATCAAGTC 909922 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 ||| || || ||||| || || | |||||| | || ||| || || ||||| Sbjct 909923 CTCCAACCTGTGCACTGAGATCATCGAGTACTCTTCCCCCGACGAGGTCGCCGTCTGCAA 909982 Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTC--AATGAAGAGACTCGCACTTTTGATTAT 76102 | || || |||| || || || |||| ||| | || ||| | || | Sbjct 909983 CCTCGCTTCCCTCGCACTCCCCGCGTTTGTCGACATGGAACGA--CGCGTCTACGACTTC 910040 Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162 | || ||||| || ||||| || | || ||||| || || ||| ||||| || Sbjct 910041 AAGAAGCTTCACGAGATCACCAAAGTCGTCACCAAGAACCTCGACCAGGTCATCTCTCGA 910100 Query 76163 AATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222 || | || ||||| | || || ||| || |||||||||||||| | || | Sbjct 910101 AACTACTACCCCGTCAAAGAGGCCAAAACGTCCAACATGCGACACAGACCCGTCGGACTC 910160 Query 76223 GGTGTTCAAGGTCTCGCGGA 76242 ||||| ||||||||||| || Sbjct 910161 GGTGTCCAAGGTCTCGCCGA 910180 >seq7 Length=1004146 Score = 122 bits (134), Expect = 1e-22 Identities = 219/320 (68%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 ||||| ||||| || | || ||||| || ||||||||||||||||| || || ||| Sbjct 957184 TTCGCTGAGCGACTGATCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCTTTC 957125 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | | || | |||||||||||||| ||||||||||| || || |||||| || || Sbjct 957124 GCCTCGATCTTCTGGTTGAAGAAGCGAGGTCTCATGCCCGGACTCACCTTCTCGAACGAG 957065 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250 | || || | || |||||||||||| || |||||| ||||||| | Sbjct 957064 TTGATCTCGAGGGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTCACCCACCTC 957005 Query 65251 CGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAG 65310 || ||||| | || ||| || | ||| | |||||||| || |||| ||| Sbjct 957004 CGACGACGACCCCACCCAGACACTGTCGAGAGGATCATCAAAGAGGCCGTCAAGATCGAG 956945 Query 65311 AAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATG 65370 ||| |||| || ||||| || ||| ||||| || ||||||||| || ||| Sbjct 956944 CAAGAGTTCCTCACCGACGCTCTGCCAGTCTCGCTCATTGGAATGAACTCTAAGCTCATG 956885 Query 65371 TCCGAGTACATTGAGTATGT 65390 | | ||||||| |||| ||| Sbjct 956884 TGCCAGTACATCGAGTTTGT 956865 >seq1 Length=8012737 Score = 82.4 bits (90), Expect = 9e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGT 65146 |||| || || || || ||||| ||||||||||| || || || ||| || | |||| Sbjct 7388775 TTGCTTTCGCTTGCGTCGAGGGAATCTTCTTCTCTGGCTCCTTTGCCGCCATCTTCTGGT 7388716 Query 65147 TGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGA 65189 |||||||| ||||||||||||| ||||| ||||| ||||| Sbjct 7388715 TGAAGAAGAGGGGTCTCATGCCCGGCCTGACTTTCTCCAATGA 7388673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569540343040