Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7 116 3e-21 >seq7 Length=1004146 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||||||| || ||| | | Sbjct 973440 ATGCAGATCTTCGTCAAGACGCTCACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCG 973499 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || ||||| || || || Sbjct 973500 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATACCACCTGACCAG 973559 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| ||||| |||||||| ||||| |||| |||| || || ||| Sbjct 973560 CAGCGACTCATCTTCGCCGGCAAACAGCTCGAGGACGGCAGAACTCTGTCCGACTACAAC 973619 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| | ||| |||| |||| |||| || || Sbjct 973620 ATCCAGAAGGAGTCGACCTTGCACCTGGTTCTGCGTCTGCGAGGTGG 973666 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784 || ||||| ||||| || ||||| || || || || | ||||| | || | || ||| Sbjct 974024 CTCACCGGCAAAACCATCACGCTGGAGGTCGAGTCCTCTGACACGATCGACAATGTCAAA 974083 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 |||||||| ||||| || || || || ||||| || |||||| | ||||| || || Sbjct 974084 TCGAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAACGTCTCATCTTCGCTGGA 974143 Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904 || ||||||||||| ||| | || || || ||||| || ||||| ||||| || Sbjct 974144 AAGCAGCTGGAGGACGGTCGAACCCTGAGCGACTACAACATCCAGAAGGAGTCGACTCTT 974203 Query 24905 CACTTGGT 24912 |||||||| Sbjct 974204 CACTTGGT 974211 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || ||||| || || ||||| || || | | Sbjct 972875 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACCCTCGAGGTCGAGTCTTCG 972934 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 972935 GACACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 972994 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || |||||||| ||||| || |||||||| || Sbjct 972995 CAGCGATTGATCTTCGCCGGAAAGCAGCTGGAAGA 973029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897555010240