Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 113 3e-20 seq7 111 1e-19 >seq1 Length=8012737 Score = 113 bits (124), Expect = 3e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || ||||| | ||||| ||||| | ||| ||||||||| ||||| ||||| || Sbjct 2303463 CCACCTCTCAATCGAAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 2303522 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || ||||| || ||||||||||| ||||| |||||||| | || Sbjct 2303523 AGAGTTCGACCATCCTCGAGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGG 2303582 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | || | |||||| Sbjct 2303583 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACC 2303642 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGG 34957 |||| ||| ||||| || ||||||||| Sbjct 2303643 TCAAGGGTGATGGTTTTGCCCGTGAGG 2303669 >seq7 Length=1004146 Score = 111 bits (122), Expect = 1e-19 Identities = 134/180 (74%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 34802 TAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGG 34861 |||||||| ||| | || | || ||||| ||||||||||||||||||| ||| |||||| Sbjct 973050 TAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG 972991 Query 34862 TCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TC 34917 || | || | ||||||||||| | || || ||||| || | ||||| || Sbjct 972990 TCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGAC--AT--TGTCGATTGTGTC 972935 Query 34918 ATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | |||||| || | ||| ||||| || || ||||||||||| |||||||||||||| Sbjct 972934 CGAAGACTCGACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 972875 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | ||| ||||||||| ||||| ||||| || || | | | || Sbjct 973652 CAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCTGCCGTC 973593 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || || || ||||||||||| ||||| |||||||| | || | ||||||||||| Sbjct 973592 CTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGTATGCCCTCCTTGTC 973533 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||||| || | || || || Sbjct 973532 CTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGACCTCGAGCGTGATCGT 973473 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| ||||| || ||||||||||| Sbjct 973472 CTTTCCGGTGAGCGTCTTGACGAAGATCTGCAT 973440 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||||||| ||||| ||||| ||| | || | || Sbjct 974214 AGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGACCGTCC 974155 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| |||||||| || ||||||||||| | || | ||||||||||| Sbjct 974154 TCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCC 974095 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| ||| || |||||| || | || ||||| Sbjct 974094 TGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATGGTT 974035 Query 34946 TTTCCCGTGAG 34956 || || ||||| Sbjct 974034 TTGCCGGTGAG 974024 Score = 84.2 bits (92), Expect = 1e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || | | | || |||| || || || || || ||||| Sbjct 973913 CTCCTTCTGGATGTTGTAGTCGGACAAGGTTCGTCCATCCTCAAGCTGTTTACCAGCGAA 973854 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||||||||||||||||| | || | ||||||||||| Sbjct 973853 GATCAGTCGTTGCTGGTCAGGGGGAATGCCCTCCTTGTC 973815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692768244952