Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5 179 4e-40 seq7 138 1e-27 seq1 98.7 1e-15 >seq5 Length=1773785 Score = 179 bits (198), Expect = 4e-40 Identities = 942/1479 (64%), Gaps = 51/1479 (3%) Strand=Plus/Minus Query 148327 ACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCG 148386 ||||||| ||| | |||||| | |||| ||||| ||||| || ||||| |||| Sbjct 910497 ACTCGTTCCAGCCGAGAATCTGAGACGTCGAAGCCGTTGGCATTGGGGCGACCAGGAGCG 910438 Query 148387 AGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCC--GCCCAGTCCCAGAGCGG 148444 |||| |||| |||| | || || |||| ||| |||| | |||||||||||| | Sbjct 910437 AGTTTCGCACACCGTGCTTGGCAATCTTGC--TTCGGAGCTCGGTCCAGTCCCAGAG-GT 910381 Query 148445 CGACGGTGTCACGTTCC-ACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTG-CCC 148502 || || | || || |||||||| | ||||| |||| | || || ||| ||| Sbjct 910380 CGGTGGGTACTCGACCCCACATGTCGAATTGCAGCTTGCC-CTGCGAGATTGGCGATCCC 910322 Query 148503 TCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCG 148562 ||||||| |||| |||| | | | |||| ||||| || ||||| ||| || Sbjct 910321 TCGTACGTCTCGTACTTGCCGTCCTTCTCAGCCATCTCGCACGAGGCTTCGAGTGCGGCG 910262 Query 148563 TAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGCCGACTCGCTTTCGTAC 148619 | ||| || |||||| || || |||||||| | || |||| | || | Sbjct 910261 TGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTCTCGAGCGGCCGGAGAG---TCAAAG 910205 Query 148620 GGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGG 148679 |||| || || || ||||||||||| || || || || || | || | ||| | | Sbjct 910204 GGCAGTCGGAGAGCCATGAACGCGTCGGCGAGACCTTGGACACCGAGTCCGACGGGTCTG 910145 Query 148680 TGTTTAATGTTGGAGAGGCGCGCGCTCTC-GAGCGGATAGTGGTTGCGGTCGATGATCTT 148738 ||| |||||||| || |||| || || |||| ||| || ||||| || Sbjct 910144 TGTCGCATGTTGGACGTTTTGGC-CTCTTTGACGGGGTAGTAGTTTCGAGAGATGACCTG 910086 Query 148739 GTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTC 148798 ||| || || || || || || || | | ||| | || ||||| | | Sbjct 910085 GTCGAGGTTCTTGGTGACGACTTTGGTGATCTCGTGAAGCTTCTTGAAGTCGTAGACG-C 910027 Query 148799 ATC-TACGATGCATCGGTTCACG--------GCGATAGAGGCTAGATTGCACACGGCCGT 148849 || | | ||| ||| ||| |||| || || || ||||| ||||| Sbjct 910026 GTCGTTCCATG--TCGACAAACGCGGGGAGTGCGAGGGAAGCGAGGTTGCAGACGGCGAC 909969 Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909 ||| || |||| |||||| | |||||| | |||||| ||| | | |||||| ||| Sbjct 909968 CTCGTCGGGGGAAGAGTACTCGATGATCTCAGTGCACAGGTTGGAGGACTTGATCGTGCC 909909 Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCC 148969 | || | || || |||| |||| ||||| ||||| |||||||| || || Sbjct 909908 GAGGTGTTGCTGGTTAGACTTGGCGTTGGCGGCGTCTTTGTAGAGCATGTATGGGGTACC 909849 Query 148970 AGTTTCCACCTGCGTTTCCACTATGAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTC 149029 ||| || ||| | || | ||| ||| ||| | | |||| ||| || || Sbjct 909848 AGTCTCGGTCTGGGCCTCGAGAATGG--CGAACCAGAGCTTTTGCGCT---TTGATGGTC 909794 Query 149030 GTAGCGACCCT------CCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTA 149083 | || |||| | ||||||| || ||| || ||| | ||| || Sbjct 909793 TTT-CGTCCCTTTCCAGCACGCTCGTAGCCCTCGTAGAGCTTTTCAAACTCGGCGCTGTG 909735 Query 149084 GCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTA 149143 | |||| |||| |||||||| | | ||||||||||| | ||| | || |||| | Sbjct 909734 GACATCGGCGAGGCCGGGGCATTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTC 909675 Query 149144 CACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCA 149203 || |||||||| ||||||||||| | |||||| ||||| | ||| || || || | | | Sbjct 909674 GACTCGCTTCATGAACAGATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGC-TCGAA 909616 Query 149204 GT-CTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACG 149262 | |||| || ||| | |||| ||| | | ||| | ||| |||||||| | Sbjct 909615 CTTCTTCTTTACCGTGGTTCTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATG 909556 Query 149263 GCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGTCGACGTGGCGCA 149319 |||| | ||| | |||| ||| || |||||| || ||||||||||| | || Sbjct 909555 GCTCGAGGTAGATGGCGAACGCACCAGGTCGCTTGTTGCCACCCTGGTCGACATATCGGG 909496 Query 149320 CCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGT-GCCGTTAGTAGAG 149378 || || || | | | | ||| || | || || ||| ||| ||||| ||| | Sbjct 909495 CCGTGGCGTCGTATGCCCTTAGCATTGGAACGATACCGTTGG-AGTAACCGTTGGTACCG 909437 Query 149379 CTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTAC 149438 |||| || ||||| | ||||| | || || ||||| || ||| | | Sbjct 909436 GCAATGTAGGAACCCTTGGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTC 909377 Query 149439 TTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTC 149498 || ||||| |||||| ||||||| |||||| || ||||| |||| | Sbjct 909376 TTGGAGATCTGGGCGCAGGTCTTGAGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGC 909317 Query 149499 ATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTG 149558 |||| | || || |||||| ||||||| || | || || | ||||| || Sbjct 909316 ATGGCGACGAGGAAACACGAGGACATTTGGGGGTTGGGTGTACCCGAGTTGAACAATGTT 909257 Query 149559 GGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCC 149618 || |||||| ||||| ||| || | ||| | | ||| | |||||| || ||||| Sbjct 909256 GGCGAGGCGTGGGTAAAGTATCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTCA 909197 Query 149619 ATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCC 149678 |||| | || ||||| || | |||||| ||||| | ||| ||||| ||||| || | Sbjct 909196 ATGTTGGCACCGTGGATACCGACGGCGACACGCATAATCATGTGCTGAGGTCGTTCGACG 909137 Query 149679 ACTTTGTTTCCAATTTTGAGCAAGTAG--CCGTTTTCTAGTGTCTTGTAGCCAAAGTACT 149736 | ||| ||| | | | |||| ||| ||||| |||||| | || || | | Sbjct 909136 ATCTTGCCGTTGATTCTCAAGAGGTAGGACCG--CTCTAGGGTCTTGAAACCGAAAAAGT 909079 Query 149737 TGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775 ||||| ||||||| ||| ||| | ||||| | ||||| Sbjct 909078 TGTAGGCAAAGTCTCGGTCGTAGATGATGGCAGAGTCGA 909040 >seq7 Length=1004146 Score = 138 bits (152), Expect = 1e-27 Identities = 328/486 (67%), Gaps = 15/486 (3%) Strand=Plus/Plus Query 120372 CTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAACGGGTTGCT 120431 ||| || ||||| | ||||||| | ||| || | | |||||| ||||| |||||| Sbjct 956756 CTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAAGGGGTTGGA 956815 Query 120432 CGCGTTAAAGTATTTCGGCTGGCCCAACTGT-ACGAGCAGTCGGTCCGCTACAAACTCAA 120490 | |||| | || | | |||| | || ||||||||||| || |||||||| | Sbjct 956816 CACGTTCCACACCTT-GTCGTTACCAAGGGCGACAAGCAGTCGGTCGGCGACAAACTCGA 956874 Query 120491 TGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACGCCGACGTGA 120550 |||||| ||||||| || | |||||| || | | || || |||| || |||| Sbjct 956875 TGTACTGGCACATGAGCTTAGAGTTCATTCCAATGAGCGAGACTGGCAGAGCGTCGGTGA 956934 Query 120551 AAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG---CGAGCATAGTGTGGCCGG 120607 ||||| | ||| || | || ||||| |||| || ||| || || ||| || Sbjct 956935 GGAACTCTTGCTCGATCTTGACGGCCTCTTTGATGATCCTCTCGA-CAGTGTCTGGGTGG 956993 Query 120608 GCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTCCGTGTGCAGGCCCT 120667 | || | || || | | || | || || || |||||||| ||||| || |||| Sbjct 956994 GG-TCGTC-GTCGGAGGTGGGT---GAAGAGGAGACAGGCAAAGTCGGTGTGGAGACCCT 957048 Query 120668 CGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGA 120727 |||| | ||| |||| |||||| || || || |||||||||| ||| | |||| | Sbjct 957049 CGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAGTCCGGGCATGAGACCTCGCTTCTTCA 957108 Query 120728 TGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGA 120787 |||| || | ||| || || || ||||| | ||||| ||| ||||||||||| Sbjct 957109 ACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAAGATACCCTCGACGGCGGCAAAGGCGA 957168 Query 120788 CCATGCGCTCGGCCAACGTCG--CCGTCTTGCTGTCGATCCACTTCATGGCCCACTCGGC 120845 || ||||| || || |||| | ||| | | ||||||||| | |||||| | ||| Sbjct 957169 TCAGTCGCTCAGCGAAAGTCGATCGGTCGTCC--GAGATCCACTTGAGGGCCCAGTTGGC 957226 Query 120846 CTTTTT 120851 |||||| Sbjct 957227 CTTTTT 957232 Score = 111 bits (122), Expect = 2e-19 Identities = 133/178 (75%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || || ||| |||||| |||||||| || Sbjct 974199 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGACC-GTCCTCCAGCTGCTTTCC 974141 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || ||||||||||| ||||| || |||||||| |||||| || Sbjct 974140 AGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTCGATTT 974081 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | || | |||||| | || ||| || || | |||| |||||||||||| ||| Sbjct 974080 GACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATGGTTTTGCCGGTGAGA 974023 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| ||| || || |||||||||||| ||||| Sbjct 973637 GGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCTGCCGTCCTCGAGCTGTTTGCC 973578 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| || || ||||| |||||||| ||||| ||| Sbjct 973577 GGCGAAGATGAGTCGCTGCTGGTCAGGTGGTATGCCCTCCTTGTCCTGAATCTTGCTCTT 973518 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | || || |||| |||| || || ||||| || || Sbjct 973517 GACGTTGTCGATGGTGTCCGAAGATTCGACCTCGAGCGTGATCGTCTTTCCGGTGAGCGT 973458 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 973457 CTTGACGAAGATCTGCAT 973440 Score = 102 bits (112), Expect = 8e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 ||| || |||||||| || ||| | || | ||||||||||| |||||||| || ||||| Sbjct 973030 GTCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGGATACCCTCCTT 972971 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||| | | ||| || |||| ||||| Sbjct 972970 GTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCCGAAGACTCGACCTCGAGGGTGAT 972911 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||||| || || || || || || |||||||| Sbjct 972910 GGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 972875 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || || | || || |||||||||||||||||||| || |||||| Sbjct 972746 TCCTCAAGCTGCTTTCCGGCAAAGATAAGTCGCTGCTGGTCGGGAGGGATACCCTCCTTG 972687 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | ||||||| | ||| || || | ||||| Sbjct 972686 TCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCAAGGGTGATT 972627 Query 133626 GTTTTGCCGGTCA 133638 || || ||||||| Sbjct 972626 GTCTTTCCGGTCA 972614 >seq1 Length=8012737 Score = 98.7 bits (108), Expect = 1e-15 Identities = 130/178 (73%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| ||| || || ||| | |||||||| || || | Sbjct 2303492 GGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCA-TCCTCGAGTTGTTTAC 2303550 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| || ||||| || |||||||| |||||| || Sbjct 2303551 CGGCGAAGATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACT 2303610 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 ||| | || | ||||| | | ||| || || | ||||| ||||||||| || || Sbjct 2303611 TGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTTTTGCCCGTGAG 2303668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420751657920