Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7 123 6e-23 seq1 87.8 4e-12 >seq7 Length=1004146 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 |||||||| || ||||| |||| ||||| ||| ||||| | || || ||| Sbjct 973746 ACAGGAAAGACCATCACCCTGGAGGTGGAGTCTTCGGACACCATTGACAATGTCAAGTCG 973805 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || ||| || ||| ||| |||| |||||||| || || Sbjct 973806 AAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAACGACTGATCTTCGCTGGTAAA 973865 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || |||||| | || ||| |||| |||||| ||||||| ||||||||||| ||| Sbjct 973866 CAGCTTGAGGATGGACGAACCTTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 973925 Query 206374 CTTGTTTTGAGACTTCGA 206391 |||||| | |||| ||| Sbjct 973926 CTTGTTCTCCGACTCCGA 973943 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| |||||||| ||||| |||||||| | || || ||| ||| ||| Sbjct 973443 CAGATCTTCGTCAAGACGCTCACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCGGAC 973502 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || || ||| || Sbjct 973503 ACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATACCACCTGACCAGCAG 973562 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| ||||||||||| || ||| | || || || || ||| || |||| |||||| || Sbjct 973563 CGACTCATCTTCGCCGGCAAACAGCTCGAGGACGGCAGAACTCTGTCCGACTACAACATC 973622 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||||| || | ||||| ||| || | || ||| Sbjct 973623 CAGAAGGAGTCGACCTTGCACCTGGTTCTGCGTCTGCGA 973661 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| |||| | ||||||||| ||||||||||| ||||||| || ||||| | ||| || Sbjct 973943 TCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGT 973884 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||| || ||||| || || |||||||| || ||||| || Sbjct 973883 TCGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTG 973839 >seq1 Length=8012737 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 ||||| || ||||| ||||| | || || || ||| ||||| |||| || ||| Sbjct 2303668 CTCACGGGCAAAACCATCACCCTTGAGGTCGAGTCTTCGGACACCATCGACAACGTCAAG 2303609 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 ||||| || || || || || || || ||| || |||| ||||||||||| Sbjct 2303608 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGCGACTCATCTTCGCCGGT 2303549 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 || || | || ||||| | ||| || |||| |||||| ||||||| |||||||| || Sbjct 2303548 AAACAACTCGAGGATGGTCGAACTCTGTCCGACTACAACATCCAGAAGGAGTCTACCCTC 2303489 Query 206371 CACCTTGT 206378 ||||| || Sbjct 2303488 CACCTCGT 2303481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820678863368