Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq7 143 4e-28 seq5 114 2e-19 >seq7 Length=1004146 Score = 143 bits (158), Expect = 4e-28 Identities = 195/265 (74%), Gaps = 9/265 (3%) Strand=Plus/Minus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC-CCGGT 1456073 || ||||||||||| || |||||||| ||||| |||||||| ||| |||||||| ||| Sbjct 957340 GAGAACATCCACTCCGAGACCTACTCTCTCCTCATCGACACATACATCAAGGACGCCGCC 957281 Query 1456074 CGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGA 1456133 ||| | | |||| || || |||||||| | || | | |||||||||| | Sbjct 957280 CGACGAACA-TACCTGTTCGAGGCTATCGACACCATCCCCTGCATCCAGAAAAAGGCCAA 957222 Query 1456134 CTGGGCGATGAAGTGGATCAACAAGGAGGGCC--TCGACACTTTGCCGAGCGGCTCGTCG 1456191 |||||| | |||||||| | ||| | || ||||| || || ||||| || ||| Sbjct 957221 CTGGGCCCTCAAGTGGAT---CTCGGACGACCGATCGAC-TTTCGCTGAGCGACTGATCG 957166 Query 1456192 GCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCA 1456250 |||||||| ||||||||| ||||| ||||| || |||| | | ||||| ||| | | Sbjct 957165 CCTTTGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCTTTCGCCTCGATCTTCTGGTTGA 957106 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||| || ||||||||||| || Sbjct 957105 AGAAGCGAGGTCTCATGCCCGGACT 957081 Score = 141 bits (156), Expect = 1e-27 Identities = 168/222 (76%), Gaps = 7/222 (3%) Strand=Plus/Minus Query 1456522 GATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGC 1456581 ||||||| ||||||||| |||||||| ||||||| ||| ||| | ||||| || | Sbjct 956972 GATCATCAAAGAGGCCGTCAAGATCGAGCAAGAGTTCCTCACCGACGCTCTGCCAGTCTC 956913 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 |||||| || |||||| | | |||||||||||||||||| | | |||||||||||||| Sbjct 956912 GCTCATTGGAATGAACTCTAA-GCTCATGTGCCAGTACATCG-AGTTTGTCGCCGACCGA 956855 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACT--ACCGGACGGCCAACCCGTTCCCATGG 1456699 ||||| | || || || | || ||| | | || | ||||||| ||| | Sbjct 956854 CTGCTTGTCGCCCTTGG-TAACGACAAGGTGTGGAACG--TGTCCAACCCCTTCGACTTT 956798 Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 |||||| ||||||||||| |||||||| ||||||| |||||| Sbjct 956797 ATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGAG 956756 >seq5 Length=1773785 Score = 114 bits (126), Expect = 2e-19 Identities = 332/512 (65%), Gaps = 16/512 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| |||||| || || || ||| |||||| || || |||||||||||| || Sbjct 909513 GGTGGCAACAAGCGACCTGGTGCGTTCGCCATCTACCTCGAGCCATGGCACGCCGACGTC 909572 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||| || ||||| | |||||||||||| || | || || | | || || Sbjct 909573 TTCGACTTCCTCGACCTAAGAAAGAACCACGGTAAAGAAGA---AGTTC---GAGCACGA 909626 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 |||||||| |||| ||| |||| ||| ||||| ||| || | | | | | | Sbjct 909627 GATCTCTTCTACGCCCTCTGGATCCCCGATCTGTTCATGAAGCGAGTCGAGTCGGATGGT 909686 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | ||||| ||||| |||||||| ||| | | |||| | Sbjct 909687 GACTGGACCCTCATGTGCCCCTCCGAATGCCCCGGCCTCGCCGATGTCCACAGCGCCGAG 909746 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| ||||| ||| || |||| || | Sbjct 909747 TTTGAAAAGCTCTACGAGGGCTACGAGCGTGCTGGAAAGGGACGAAAGACCATCAAAGC- 909805 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 ||| | || |||||| |||||| ||| |||||| | |||||| || || || |||||| Sbjct 909806 GCA--AAAGCTCTGGTTCGCCATTCTCGAGGCCCAGACCGAGACTGGTACCCCATACATG 909863 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGC--AACCAGCAGAACCTGGGCACCACGACAG 262202 ||||||| ||||||| |||| | | || |||||||| |||| ||||| | | Sbjct 909864 CTCTACAAAGACGCCGCCAAC--GCCAAGTCTAACCAGCAACACCTCGGCACGATCAAGT 909921 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 ||||||||||||| |||||| || ||| || || ||| ||||| || |||| Sbjct 909922 CCTCCAACCTGTGCACTGAGATCATCGAGTACTCTTCCCCCGACGAGGTCGCCGTCTGCA 909981 Query 262263 ACCTCTCGAGCGTGGCCCTGCCCAAGTTTGTC 262294 ||||| | | | || || ||| ||||||| Sbjct 909982 ACCTCGCTTCCCTCGCACTCCCCGCGTTTGTC 910013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810428385296