Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 125 7e-24 seq7 118 1e-21 seq1 89.7 5e-13 >seq5 Length=1773785 Score = 125 bits (138), Expect = 7e-24 Identities = 389/599 (65%), Gaps = 5/599 (1%) Strand=Plus/Plus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 |||| | |||| |||||||||| | || |||||| ||| |||||| | |||| || Sbjct 909110 CTACCTCTTGAGAATCAACGGCAAGATCGTCGAACGACCTCAGCACATGATTATGCGTGT 909169 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 || || || || ||||| | |||||||| | | | || || ||| | | ||||| Sbjct 909170 CGCCGTCGGTATCCACGGTGCCAACATTGACCGAGTCCTCGAGACCTACAACCTCATGTC 909229 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703 | | | ||||| ||||| ||||| || |||| | |||| ||| | || || Sbjct 909230 CGAGCGATACTTTACCCACGCCTCGCCAACATTGTTCAACTCGGGTACACCCAACCCCCA 909289 Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763 | ||||||||||||| | | ||||||| || ||| |||||||| || ||| | || Sbjct 909290 AATGTCCTCGTGTTTCCTCGTCGCCATGCGAGACGACTCGATCGACGGTATCTACGAGAC 909349 Query 7764 GCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACG 7822 ||| | || |||||| | || ||||| | ||| || || ||||| || | || Sbjct 909350 GCT-CAAGACCTGCGCCCAGATCTCCAAGACTGCCGGTGGTATCGGTCTCCACATTCACA 909408 Query 7823 ACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGC 7882 || | || ||||| ||| | ||| | |||||||| | ||| |||| | | | Sbjct 909409 ACATCCGAGCCAAGGGTTCCTACATTGCCGGTACCAACGGTTACTCCAACGGTATCGTTC 909468 Query 7883 CCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCA 7939 | ||| | | | | | | | ||| ||| |||| |||||||| || ||||| Sbjct 909469 CAATGCTAAGGGCATACGACGCCACGGCCCGATATGTCGACCAGGGTGGCAACAAGCGAC 909528 Query 7940 AAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATC 7999 || || |||||||| | ||||| |||||||| ||| | | || | || | | Sbjct 909529 CTGGTGCGTTCGCCATCTACCTCGAGCCATGGCACGCCGACGTCTTCGACTTCCTCGACC 909588 Query 8000 TGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGG 8059 | | ||| ||| ||||| ||| || ||||| |||| || | ||| Sbjct 909589 TAAGAAAGAACCACGGTAAAGAAGAAGTTCGAGCACGAGATCTCTTCTACGCCCTCTGGA 909648 Query 8060 TGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCC 8118 | ||||||||||| |||| ||| || | | || | | ||| | |||||||||||| Sbjct 909649 TCCCCGATCTGTTCATGAAGCGAGTCGAGTCGGATGGTGACTGGACCCTCATGTGCCCC 909707 >seq7 Length=1004146 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545 || |||| || |||| || ||||| | || || ||||| || |||||||||||| | Sbjct 973666 CCACCTCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 973607 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | | || ||| |||||||||||||| || || || | |||||||| || || || Sbjct 973606 AGAGTTCTGCC-GTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGG 973548 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||| || || || ||||| || ||||| ||| | ||||| || ||||| || Sbjct 973547 TATGCCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGAC 973488 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || || || ||||| | || || ||||| || |||||| Sbjct 973487 CTCGAGCGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCATT 973439 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||||||||| | || | ||| || || || ||||| || ||||||||||||| Sbjct 974229 CCACCTCTGAGTCGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTC 974170 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| || ||||| || || || || || | ||| ||||| ||||| || Sbjct 974169 AGGGTTCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGG 974110 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || |||||| ||| | ||||| || || || || Sbjct 974109 ATACCCTCCTTGTCCTGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACC 974050 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || || || |||||||| ||||| Sbjct 974049 TCCAGCGTGATGGTTTTGCCGGT 974027 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| |||||| | || ||||| || || || ||||| || |||||||||||| Sbjct 973948 CCACCTCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 973889 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || |||||||| || || || |||| || ||||| || || || Sbjct 973888 AAGGTTCGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGGGGA 973829 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| ||| | ||||| || || ||||| Sbjct 973828 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACC 973769 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAA 134692 || || || ||||| || || || || Sbjct 973768 TCCAGGGTGATGGTCTTTCCTGTCAA 973743 >seq1 Length=8012737 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134481 GCCTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAG 134540 ||| | || ||||| | ||| | |||||||| || || || ||||| || ||||||||| Sbjct 2303457 GCCATACCACCTCTCAATCGAAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAG 2303516 Query 134541 TCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCG 134600 ||| | || || || ||||| ||||| || || || || | |||||||| || Sbjct 2303517 TCGGACAGAGTTCGACCATCCTCGAGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCA 2303576 Query 134601 GGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGAT 134660 || || || || || || || || || || ||||| ||| | ||||| || || Sbjct 2303577 GGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGAC 2303636 Query 134661 TCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || || || || |||||||| || || Sbjct 2303637 TCGACCTCAAGGGTGATGGTTTTGCCCGT 2303665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398349460160