Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 181 1e-40 seq7 122 1e-22 >seq5 Length=1773785 Score = 181 bits (200), Expect = 1e-40 Identities = 673/1044 (64%), Gaps = 23/1044 (2%) Strand=Plus/Minus Query 111053 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 111112 || ||||||||||| ||||| | || | |||||||||||||| || ||| || || Sbjct 910180 TCGGCGAGACCTTGGACACCGAGTCCGACGGGTCTGTGTCGCATGTTGGACGTTTTGGCC 910121 Query 111113 GTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTT 111172 | ||||| || | |||| ||||| ||| || || ||||| || | || Sbjct 910120 TCTTTGACGGGGTAGTAGTTTCGAGAGATGACCTGGTCGAGGTTCTTGGTGACGACTTTG 910061 Query 111173 GTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATT--GACATACTTTG 111230 ||||| || ||||| || | | || | ||| || | ||| |||| || | Sbjct 910060 GTGATCTCGTGAAGCTTCTTGAAGTCGTAGACGCG--TCGTTCCATGTCGACAAACGCGG 910003 Query 111231 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 111290 | || |||| || || | ||||| || || ||| || | |||||| | | Sbjct 910002 GGAGTGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTCGGGGGAAGAGTACTCGATGA 909943 Query 111291 TTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGT 111350 | || || || | |||||| ||| ||||| || | | | |||||| ||| || Sbjct 909942 TCTCAGTGCACAGGTTGGAGGACTTGATCGTGCCGAGGTGTTGCTGGTTAGACTTGGCGT 909883 Query 111351 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAG 111410 || || || |||||||||||||| || || || ||||| ||||| | | |||||| | Sbjct 909882 TGGCGGCGTCTTTGTAGAGCATGTATGGGGTACCAGTCTCGGTCTGGGCCTCGAGAATGG 909823 Query 111411 CCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTT--GGCCCGTCCCTCCGC-CTCGTAC 111466 | ||| | | | ||| | | |||| || | ||| | || | | |||||| Sbjct 909822 CGAACCAGAGCTTTTGCGCTTTG----ATGGTCTTTCGTCCCTTTCCAGCACGCTCGTAG 909767 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTC 111525 |||||| ||||||||| | | | |||| ||| || || || || | Sbjct 909766 CCCTCGTAGAGCTTTTCAAACTCGGCGCTGTGGACATCGGCGAGGCCGGG-GCATTCGGA 909708 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || || | || | ||| | |||| | ||| || ||||||||||| || || || || Sbjct 909707 GGGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTTCATGAACAGATCGGGGAT 909648 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| |||| | |||||||||| ||| | ||||| | ||| ||||| || || Sbjct 909647 CCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTTACCGTGGTTCTTTCTTAG 909588 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || ||||| || | || || |||||||||||||| || |||| |||| || Sbjct 909587 GTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAACGCACCAGG 909528 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 || ||| | | ||| | || | ||||| || || ||||||| || | | ||||| Sbjct 909527 TCGCTT--GTTG-CCACCCTGGTCGACATATCGGGCCGTGGCGTCGTATGCCCTTAGCAT 909471 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 ||||| ||||| | || | ||| || || || ||| || ||||||| | Sbjct 909470 TGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTTGGCTCGGAT 909411 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 | || ||||| | || ||||| || || ||| ||||| || || || | | || Sbjct 909410 GTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAG 909351 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 || | |||||||||| ||| ||||| || |||||| ||||| || |||||| Sbjct 909350 CGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAGGAAACACGAGGACAT 909291 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 111999 || || | |||||||| | ||||| | ||||| | ||||| | || | | Sbjct 909290 TTGGGGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAAGTATCGCTC 909231 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 |||||| || ||| ||||| | ||| ||||||| | |||||||| |||| || Sbjct 909230 GGACATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCGTGGATACCGACGGC 909171 Query 112060 GACCCGCATGAACATGTACTGTGG 112083 ||| ||||| | ||||| ||| || Sbjct 909170 GACACGCATAATCATGTGCTGAGG 909147 >seq7 Length=1004146 Score = 122 bits (134), Expect = 1e-22 Identities = 221/321 (69%), Gaps = 2/321 (1%) Strand=Plus/Plus Query 122497 ACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG-GTTACATGGGAG 122555 ||| |||| ||||||| | |||| || ||||||||| || ||||| | || ||| || Sbjct 956865 ACAAACTCGATGTACTGGCACATGAGCTTAGAGTTCATTCCAATGAGCGAGAC-TGGCAG 956923 Query 122556 TGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGT 122615 ||||| || |||| ||| ||| |||| || |||||||| | ||| | || ||| Sbjct 956924 AGCGTCGGTGAGGAACTCTTGCTCGATCTTGACGGCCTCTTTGATGATCCTCTCGACAGT 956983 Query 122616 TTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTGGTGGAG 122675 || | ||||| || | ||||||| |||||| || |||||| Sbjct 956984 GTCTGGGTGGGGTCGTCGTCGGAGGTGGGTGAAGAGGAGACAGGCAAAGTCGGTGTGGAG 957043 Query 122676 ACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTT 122735 |||||| || | || || | || || |||||| || || ||||||||||| ||||| Sbjct 957044 ACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAGTCCGGGCATGAGACCTCGCTT 957103 Query 122736 CTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795 ||||||||| | || | | ||| || || ||||||||||||||||| || ||||| Sbjct 957104 CTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAAGATACCCTCGACGGCGGCAAA 957163 Query 122796 CGCAAAAAGGCGTTCGGCGAA 122816 || | || || || ||||| Sbjct 957164 GGCGATCAGTCGCTCAGCGAA 957184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800