Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 246 4e-60 seq7 132 6e-26 seq1 111 2e-19 >seq5 Length=1773785 Score = 246 bits (272), Expect = 4e-60 Identities = 841/1300 (65%), Gaps = 33/1300 (3%) Strand=Plus/Minus Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402 |||||| || || || || | || || || |||||||||||| | ||||| || Sbjct 910364 CCACATGTCGAATTGCAGCTTGCCCTGCGAGATTGGCGATCCCTCGTACGTCTCGTACTT 910305 Query 118403 GCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAA 118462 ||| || ||| |||| ||| | || ||||| || ||||| || || || || || Sbjct 910304 GCCGTCCTTCTCAGCCATCTCGCACGAGGCTTCGAGTGCGGCGTGGTAGATGGTCTCGAA 910245 Query 118463 AATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA--TCAAACGCGAGTCGGCACAAAATA 118520 || || || | || | | | |||| ||||| | |||||| || Sbjct 910244 GATCTGAATGTTGA--GCTCTCGAGCGGCCGGAGAGTCAAAGGGCAGTCGGAGAGCCATG 910187 Query 118521 AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTC 118580 || | || |||||||||||||||||||| || | || | |||| ||| || ||| | Sbjct 910186 AACGCGTCGGCGAGACCTTGGACACCGAGTCCGACGGGTCTGTGTCGCATGTTGGACGTT 910127 Query 118581 CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACA 118640 || | ||||| || | || | | ||| ||| | || || |||||||| Sbjct 910126 TTGGCCTCTTTGACGGGGTAGTAGTTTCGAGAGATGACCTGGTCGAGGTTCTTGGTGACG 910067 Query 118641 ACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT--GACAT 118698 || || ||||| || |||||||| | | | || | ||| || | ||| |||| Sbjct 910066 ACTTTGGTGATCTCGTGAAGCTTCTTGAAGTCGTAGACGCG--TCGTTCCATGTCGACAA 910009 Query 118699 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACT 118758 || || || |||| || || || || || || | | ||| || || ||||| Sbjct 910008 ACGCGGGGAGTGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTCGGGGGAAGAGTACT 909949 Query 118759 CTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT 118818 | || || || ||||||| ||| || ||| || ||||| | || | || || |||| Sbjct 909948 CGATGATCTCAGTGCACAGGTTGGAGGACTTGATCGTGCCGAGGTGTTGCTGGTTAGACT 909889 Query 118819 TTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGA 118878 | | ||| || || ||||| ||||||||||| || || ||||| || |||| || || Sbjct 909888 TGGCGTTGGCGGCGTCTTTGTAGAGCATGTATGGGGTACCAGTCTCGGTCTGGGCCTCGA 909829 Query 118879 GAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTC---- 118933 |||| || ||||| | | || ||| | ||| || ||| |||| | | Sbjct 909828 GAATGGCGAACCAGAGCTTTTGC-GCTTTGA---TGGTCTT---TCGTCCCTTTCCAGCA 909776 Query 118934 --CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991 |||||| |||||| ||||||||| | | | | || | ||| || || Sbjct 909775 CGCTCGTAGCCCTCGTAGAGCTTTTCAAACTCGGCGCTGTGGACATCGGCGAGGCCGGG- 909717 Query 118992 GCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAG 119050 || || ||| || | ||| | ||| | |||| || ||| || ||||||||||| || Sbjct 909716 GCATTCGGAGGGGCACATGAGGGTCCAGTCACCATCCGACTCGACTCGCTTCATGAACAG 909657 Query 119051 GTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATT 119110 || ||||||||||| || |||||||||| || ||| ||||||| | || || || Sbjct 909656 ATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTGCTCGAACTTCTTCTTTACCGTGGTT 909597 Query 119111 GAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGAT 119170 | | || | ||||| | || || |||||||| || || ||||| | |||| Sbjct 909596 CTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 909537 Query 119171 TGACCCCTTACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATAC 119224 | || | | || ||| |||||| ||||| | || ||||||| || | Sbjct 909536 CGCACC---AGGTCGCTTGTTGCCACCCTGGTCGACATATCGGGCCGTGGCGTCGTATGC 909480 Query 119225 ACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATT 119284 | |||||||||| |||||| | ||| | || || || || ||| || || Sbjct 909479 CCTTAGCATTGGAACGATACCGTTGGAGTAACCGTTGGTACCGGCAATGTAGGAACCCTT 909420 Query 119285 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCA 119344 ||||| || | ||| ||||| | ||| ||||| || || ||| ||||| || ||||| Sbjct 909419 GGCTCGGATGTTGTGAATGTGGAGACCGATACCACCGGCAGTCTTGGAGATCTGGGCGCA 909360 Query 119345 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 119404 | |||| | ||||||| || ||||||||||| | | |||| |||||| || Sbjct 909359 GGTCTTGAGCGTCTCGTAGATACCGTCGATCGAGTCGTCTCGCATGGCGACGAGGAAACA 909300 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 |||||||| || |||||||||| | |||||| | ||||| | |||||| | || Sbjct 909299 CGAGGACATTTGGGGGTTGGGTGTACCCGAGTTGAACAATGTTGGCGAGGCGTGGGTAAA 909240 Query 119465 CATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAAT 119524 | | |||||| || ||||||||| | ||| | ||||| | ||||| || Sbjct 909239 GTATCGCTCGGACATGAGGTTGTAGGTCTCGAGGACTCGGTCAATGTTGGCACCGTGGAT 909180 Query 119525 ACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCT 119584 ||||| | ||| ||||||| ||||| || ||| ||| | | | || | || || Sbjct 909179 ACCGACGGCGACACGCATAATCATGTGCTGAGGTCGTTCGACGATCTTGCCGTTGATTCT 909120 Query 119585 CTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAG 119624 | |||||| | ||| | |||||||| ||| ||| || Sbjct 909119 CAAGAGGTAGGACCGCTCTAGGGTCTTGAAACCGAAAAAG 909080 >seq7 Length=1004146 Score = 132 bits (146), Expect = 6e-26 Identities = 180/247 (73%), Gaps = 8/247 (3%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||||||||||||||| | ||||| | || ||||||||| || || Sbjct 957026 GGCAAAGTCGGTGTGGAGACCCTCGTCCCTCGAGATCAACTCGTTCGAGAAGGTGAGTCC 957085 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||||||||| ||||||||||||||||| |||| || || |||||||||||||| Sbjct 957086 GGGCATGAGACCTCGCTTCTTCAACCAGAAGATCGAGGCGAAAGAACCAGAGAAGAAGAT 957145 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAG--GAGCGGGACTTTGTATC 130191 ||||| || || || || | || |||||||| |||| || ||| | || Sbjct 957146 ACCCTCGACGGCGGCAAAGGCGATCAGTCGCTCAGCGAAAGTCGATCGG----TCGTCCG 957201 Query 130192 A-AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTT 130250 | | |||||| | ||||| | |||||||||| ||| || |||| ||| | ||| || | Sbjct 957202 AGATCCACTTGAGGGCCCAGTTGGCCTTTTTCTGGATGCAGGGGATGGTGTCGATAGCCT 957261 Query 130251 CAAAGAG 130257 | || || Sbjct 957262 CGAACAG 957268 >seq1 Length=8012737 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| | | ||| | ||||| ||||| ||| || ||||||||||||| |||| Sbjct 7388652 CCCTCGTCCCTGCTGATCAACTCATTGGAGAAAGTCAGGCCGGGCATGAGACCCCTCTTC 7388711 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 ||||||||||| || || ||| ||||||||||||||||| ||||| || || ||||| Sbjct 7388712 TTCAACCAGAAGATGGCGGCAAAGGAGCCAGAGAAGAAGATTCCCTCGACGCAAGCGAAA 7388771 Query 130154 GCAA 130157 |||| Sbjct 7388772 GCAA 7388775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435138156480