Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7 149 2e-30 seq2 123 8e-23 >seq7 Length=1004146 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | || |||||||| || ||||||||||| || || || || || || Sbjct 973952 CATACCACCTCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 973893 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || ||||| ||||| ||||| ||||| ||||| ||||| || |||||||| ||||| Sbjct 973892 GGACAAGGTTCGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGG 973833 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || ||||| ||||| | || || | || Sbjct 973832 GGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTC 973773 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || | |||||||| || Sbjct 973772 CACCTCCAGGGTGATGGTCTTTCCTGT 973746 Score = 114 bits (126), Expect = 4e-20 Identities = 169/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||||||||| || | | ||||| || || | || ||||| || || || || | Sbjct 973674 TTTGCATACCACCTCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGT 973615 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | |||| || || || || ||||| || || ||||| || || ||||| | Sbjct 973614 AGTCGGACAGAGTTCTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGT 973555 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT-ACATTATCAATCGAATCAGAT 140681 |||| || || || || || |||||||| || ||| || || || || || | || || Sbjct 973554 CAGGTGGTATGCCCTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAA 973496 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||| || || || || | ||||||||||| || || || || || ||||||||| Sbjct 973495 GATTCGACCTCGAGCGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCATT 973439 Score = 100 bits (110), Expect = 9e-16 Identities = 137/190 (72%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| |||||||| ||||| || || || || || || | ||||| || || | Sbjct 974212 GACCAAG-TGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGACCGTCCT 974154 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646 | || || |||||||| ||||| ||||||||||| || || || || || || || |||| Sbjct 974153 CCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCT 974094 Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCT 140706 | || || | ||| ||||| || |||| ||||| | || || || || || | || | Sbjct 974093 GGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATGGTTT 974034 Query 140707 TTCCGGTTAG 140716 | ||||| || Sbjct 974033 TGCCGGTGAG 974024 Score = 98.7 bits (108), Expect = 3e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 140562 TAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGA 140621 || ||||| | ||||| ||||| ||||| || ||||| |||||||| || || ||||| Sbjct 972767 TAGTCAGAAAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGTCGCTGCTGG 972708 Query 140622 TCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGAT 140681 || ||||| || || || || |||||||| || | || || || || || | || || Sbjct 972707 TCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAA 972648 Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || ||||| || | |||||||||||| Sbjct 972647 GACTCGACCTCAAGGGTGATTGTCTTTCCGGT 972616 >seq2 Length=2864929 Score = 123 bits (136), Expect = 8e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 349217 GGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAAT 349276 || || || || |||||||| || || ||||||||||| || || || || ||||| || Sbjct 1417933 GGAACCACATACTCTTGTGTCGCCGTGTGGCAAAATGACCGAGTTGAGATCATTGCCAAC 1417992 Query 349277 GATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATT 349336 || || |||||| |||| || ||||| ||||| || || | ||| |||||||| ||||| Sbjct 1417993 GACCAGGGTAACCGAACCACCCCATCCTACGTCGCCTTCAACGACTCTGAGCGTCTGATT 1418052 Query 349337 GGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAG 349396 || ||| | || || || |||| || || ||| | || || || || || || ||| Sbjct 1418053 GGAGATGCCGCCAAGAACCAAGTCGCCATGAACCCATACAACACCGTCTTCGACGCCAAG 1418112 Query 349397 CGACTTATTGG 349407 ||||| ||||| Sbjct 1418113 CGACTGATTGG 1418123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254244686424