Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5 306 4e-78 seq7 132 5e-26 seq1 120 3e-22 >seq5 Length=1773785 Score = 306 bits (338), Expect = 4e-78 Identities = 901/1379 (65%), Gaps = 36/1379 (3%) Strand=Plus/Minus Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||| ||||| || |||||| ||||| ||||||| ||| ||||| ||||| Sbjct 910513 GTGTATGGCTCGAAGCACTCGTTCCAGCCGAGAATCTGAGACGTCGAAGCCGTTGGCATT 910454 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTT------CTTGATATC----CTCGCG 80504 ||| |||||| || || || |||| |||||||| |||| | || |||| Sbjct 910453 GGGGCGACCAGGAGCGAGTTTCGCACACCGTGCTTGGCAATCTTGCT-TCGGAGCTCGGT 910395 Query 80505 CAAATCTGACCAAAAATCAACCCCAACGCTGTGACCCCACATGTCGTGCTGCAAGATGCC 80564 | | || ||| | || || | |||||||||||||| |||| |||| Sbjct 910394 CCAGTC---CCAGAGGTCGGTGGGTACTC---GACCCCACATGTCGAATTGCAGCTTGCC 910341 Query 80565 CTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACA 80624 || ||| || || ||| || ||||||||||| ||| ||| ||| |||| ||| || Sbjct 910340 CTGCGAGATTGGCGATCCCTCGTACGTCTCGTACTTGCCGTCCTTCTCAGCCATCTCGCA 910281 Query 80625 CGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGC 80684 ||| | || || ||||| || ||| ||| |||| |||| | | || || Sbjct 910280 CGAGGCTTCGAGTGCGGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTCTCGAGC 910221 Query 80685 CTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCC 80744 || ||| || | || | | ||||||| |||| || || || || || || Sbjct 910220 GGCCGGAGAGTCAAAGGGCAGTCGGAGAGCCATGAACGCGTCGGCGAGACCTTGGACACC 910161 Query 80745 GATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTT 80804 || ||| || | ||| ||| |||| || | |||||| | ||||| |||| Sbjct 910160 GAGTCCGACGGGTCTGTGTCGCATGTTGGACGTTTTGGCCTCTTTGACGGGGTAGTAGTT 910101 Query 80805 ATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTG 80864 | |||||| ||| ||||| || || || || | || ||||| |||| Sbjct 910100 TCGAGAGATGACCTGGTCGAGGTTCTTGGTGACGACTTTGGTGATCTCGTGAAGCTTCTT 910041 Query 80865 AAAGTCGAAT-----TGGTTCCCCTTC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATT 80918 |||||| | | ||||| || ||||| || || || ||||| || || || Sbjct 910040 GAAGTCGTAGACGCGTCGTTCCATGTCGACAAACGCGGGGAGTGCGAGGGAAGCGAGGTT 909981 Query 80919 GCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGA 80978 ||| ||||| ||||| || | | |||||| ||| || ||||||| || || || Sbjct 909980 GCAGACGGCGACCTCGTCGGGGGAAGAGTACTCGATGATCTCAGTGCACAGGTTGGAGGA 909921 Query 80979 CTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACAT 81038 ||| || || || |||| || |||||| |||||||||||| ||||| |||||| ||| Sbjct 909920 CTTGATCGTGCCGAGGTGTTGCTGGTTAGACTTGGCGTTGGCGGCGTCTTTGTAGAGCAT 909861 Query 81039 GTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTT 81098 ||| |||||||| |||||| ||| | || ||| |||||| ||| | || |||| || Sbjct 909860 GTATGGGGTACCAGTCTCGGTCTGGGCCTCGAGAATGGCGAACCAGAGCTTTTGCGCTTT 909801 Query 81099 GACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGG 81157 || ||| || || || | | | || |||| ||||| || |||| || Sbjct 909800 GATGGTCTTTCGTCCCTTTCCAGCACGCTCGTAGCCCTCGTAGAGCTTT-TCAAACTCGG 909742 Query 81158 CACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGT 81217 | | ||| | || | |||| | ||||| ||| |||||||| ||| |||||| | Sbjct 909741 CGCTGTGGACATCGGCGAGGCCGGGGCATTCGGAGGGGCACATGAGGGTCCAGTCACCAT 909682 Query 81218 CGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGC 81277 | ||| || ||||||||| || ||||||||||||||| ||| || || || Sbjct 909681 CCGACTCGACTCGCTTCATGAACAGATCGGGGATCCAGAGGGCGTAGAAGAGATCTCGTG 909622 Query 81278 AGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCAT 81337 || | || || | ||| ||||| | | ||||| ||||| | || ||| || | Sbjct 909621 CTCGAACTTCTTCTTTACCGTGGTTCTTTCTTAGGTCGAGGAAGTCGAAGACGTCGGCGT 909562 Query 81338 GCCATGGCTCCAGATACACGGCGATCGACCC------CTTGCGACGGCCACCCTGGTTGA 81391 |||||||||| || || | ||||| || || |||| ||||||||||| || Sbjct 909561 GCCATGGCTCGAGGTAGATGGCGAACGCACCAGGTCGCTTGTT---GCCACCCTGGTCGA 909505 Query 81392 CGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGT 81451 | || ||||| || |||| || | | | ||| || | |||||| | || | ||||| Sbjct 909504 CATATCGGGCCGTGGCGTCGTATGCCCTTAGCATTGGAACGATACCGTTGGAGTAACCGT 909445 Query 81452 TCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTG-AAAGACCGATGCCA 81510 | ||||| | || || |||||||| || | ||| ||| || |||||||| ||| Sbjct 909444 TGGTACCGGCAATGTAGGAACCCTTGGCTCGGATGTTG-TGAATGTGGAGACCGATACCA 909386 Query 81511 CCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTA 81570 || | ||| || ||||| || || || | ||||| || || || ||||| Sbjct 909385 CCGGCAGTCTTGGAGATCTGGGCGCAGGTCTTGAGCGTCTCGTAGATACCGTCGATCGAG 909326 Query 81571 TCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTG 81630 || | | |||| | | | |||||| ||||| || ||| | || || | ||| Sbjct 909325 TCGTCTCGCATGGCGACGAGGAAACACGAGGACATTTGGGGGTTGGGTGTACCCGAGTTG 909266 Query 81631 AACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTG 81690 |||| |||||| | ||||| | || || || | ||||| |||| ||||| || | Sbjct 909265 AACAATGTTGGCGAGGCGTGGGTAAAGTATCGCTCGGACATGAGGTTGTAGGTCTCGAGG 909206 Query 81691 ACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 || || ||| | | ||||||| ||||||| || |||||||||| ||||| ||| || Sbjct 909205 ACTCGGTCAATGTTGGCACCGTGGATACCGACGGCGACACGCATAATCATGTGCTGAGG 909147 >seq7 Length=1004146 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||||||||| ||||| ||||| || || || ||||| || || Sbjct 973439 AATGCAGATCTTCGTCAAGACGCTCACCGGAAAGACGATCACGCTCGAGGTCGAATCTTC 973498 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || | ||| || ||||||||||||||||| || || || ||||| Sbjct 973499 GGACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATACCACCTGACCA 973558 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| || || || || || || || |||||||| | | || || | ||||| || Sbjct 973559 GCAGCGACTCATCTTCGCCGGCAAACAGCTCGAGGACGGCAGAACTCTGTCCGACTACAA 973618 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | || || || ||||||| || ||||| Sbjct 973619 CATCCAGAAGGAGTCGACCTTGCACCTGGTTCTGCGTCTGCGAGGTGG 973666 Score = 129 bits (142), Expect = 7e-25 Identities = 154/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 27426 GCTT-ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGA 27484 |||| || || ||||| || || || ||||| ||||| || | ||||| ||| | | Sbjct 973741 GCTTGACAGGAAAGACCATCACCCTGGAGGTGGAGTCTTCGGACACCATTGACAATGTCA 973800 Query 27485 AGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTG 27544 || | || ||||||||||||||||| ||||| || |||||||| || || || || |||| Sbjct 973801 AGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAACGACTGATCTTCGCTG 973860 Query 27545 GTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTC 27604 |||| || || ||||||| || ||| | | ||||| || |||| ||||| || |||| Sbjct 973861 GTAAACAGCTTGAGGATGGACGAACCTTGTCCGACTACAACATCCAGAAGGAGTCTACTC 973920 Query 27605 TTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || || | || || || ||||| Sbjct 973921 TCCACCTTGTTCTCCGACTCCGAGGTGG 973948 Score = 123 bits (136), Expect = 3e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| ||||| || ||||| |||||| | ||||| ||||| Sbjct 973152 AATGCAGATCTTCGTCAAGACCCTTACTGGAAAGACGATTACTTTGGAGGTCGAGTCTTC 973211 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | ||| ||||| || || |||||||||||||||||||| || ||||| Sbjct 973212 GGACACTATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGAATTCCACCTGACCA 973271 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGA 27560 |||||| || || || || ||||| || || ||||| Sbjct 973272 GCAGCGACTCATCTTCGCCGGTAAACAGCTGGAGGA 973307 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || |||||||| || || || || ||||| ||||| ||| | || | ||| | || Sbjct 974024 CTCACCGGCAAAACCATCACGCTGGAGGTCGAGTCCTCTGACACGATCGACAATGTCAAA 974083 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| || || || |||||||| ||||| || || ||||| Sbjct 974084 TCGAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAACGTCTCATCTTCGCTGGA 974143 Query 27547 AAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCT 27605 ||||| || ||||| | ||| ||||| ||| ||||| || |||| ||||| || ||||| Sbjct 974144 AAGCAGCTGGAGGACGGTCGAACCCTGAGC-GACTACAACATCCAGAAGGAGTCGACTCT 974202 Query 27606 TCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||| | ||| | || || | ||||| || Sbjct 974203 TCACTTGGTCCTCCGACTCAGAGGTGGTCA 974232 Score = 111 bits (122), Expect = 2e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || ||||| || || || || ||||| ||||| Sbjct 972875 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACCCTCGAGGTCGAGTCTTCG 972934 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||| || ||||| |||||| Sbjct 972935 GACACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 972994 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 ||||| | || || || || ||||| || || || | || ||||| | ||||| Sbjct 972995 CAGCGATTGATCTTCGCCGGAAAGCAGCTGGAAGACGGCCGAACCCTCTCGGACTA 973050 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||| ||||| || | || | || | ||| | Sbjct 972616 ACCGGAAAGACAATCACCCTTGAGGTCGAGTCTTCCGACACTATCGACAACGTCAAGTCC 972675 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| || ||||| ||||||||||| || || ||||| || ||| Sbjct 972676 AAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGACTTATCTTTGCCGGAAAG 972735 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 || || ||||||| || ||||| | ||||| Sbjct 972736 CAGCTTGAGGATGGCCGAACCCTTTCTGACTA 972767 >seq1 Length=8012737 Score = 120 bits (132), Expect = 3e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || || ||||| || || || |||||||| ||||| || | ||| | || | ||| Sbjct 2303668 CTCACGGGCAAAACCATCACCCTTGAGGTCGAGTCTTCGGACACCATCGACAACGTCAAG 2303609 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| || || || ||||||||||| || || || || ||| Sbjct 2303608 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGCGACTCATCTTCGCCGGT 2303549 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 || ||||||||||||| ||| || || | ||||| || |||| ||||| || || || Sbjct 2303548 AAACAACTCGAGGATGGTCGAACTCTGTCCGACTACAACATCCAGAAGGAGTCTACCCTC 2303489 Query 27607 CATCTAGTC 27615 || || ||| Sbjct 2303488 CACCTCGTC 2303480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310342968960