Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3 132 4e-26 >seq3 Length=2284511 Score = 132 bits (146), Expect = 4e-26 Identities = 243/349 (70%), Gaps = 8/349 (2%) Strand=Plus/Minus Query 30114 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30173 |||| |||||||| |||| | || || | || || ||||||||| |||| || Sbjct 1792834 CTTTCGGGTTCCATGCGCTAAGGACTATTCTCCGATCCGTGGGGTTGTTCTTGATCTTGT 1792775 Query 30174 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTC--ATGTCCGT 30231 | | | | | ||| | ||||| || || | || ||||| || |||| | |||| Sbjct 1792774 CAATGACCTCTTGTAATTGATCTACTCCTTTTCCATGGTAGT-TGTCCTCGCAAGTCCC- 1792717 Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291 |||||||||||| || |||||||| ||||| || ||||||||||| ||||| || || | Sbjct 1792716 GTACTCTGCTCCAAAGTGCCTCCATTGGAATCCATACACCGGTCCAAGGTCACCTTC--C 1792659 Query 30292 CCTGTGCTCGA-AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349 | | || || |||||| | |||||||| | ||||| || || || | |||||||| Sbjct 1792658 CGTCTGTGAGATAGCCCCACTTTGTCCAAGTACTCTCTCGAGCCATTCCCTTCCCAGATA 1792599 Query 30350 TTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30409 || || |||||||| | | ||| || ||| | || ||||| ||||| |||||| Sbjct 1792598 TTCACGCCCTTCTCGCTCAATTTCTTGCCGTCGGTGCAGCCGCTGACAAACCATAGCAGC 1792539 Query 30410 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30458 || || | ||| || || || | |||||| ||||| || |||| Sbjct 1792538 TCTTCGATGACACCCCGTGTGAATACTCGCTTGGTAGTGAGTAGAGGAA 1792490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310360384736