Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7 163 7e-35 seq1 132 1e-25 >seq7 Length=1004146 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| | || ||||| || |||||||| || || | || || || || || Sbjct 973651 AGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCTGCCGTCC 973592 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| ||||| |||||||| || || || |||||||| || | || ||||||||| Sbjct 973591 TCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGTATGCCCTCCTTGTCC 973532 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || ||| |||||||| ||||||||| Sbjct 973531 TGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGACCTCGAGCGTGATCGTC 973472 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| ||||| ||||| || || | ||||||| Sbjct 973471 TTTCCGGTGAGCGTCTTGACGAAGATCTGCATT 973439 Score = 150 bits (166), Expect = 4e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| ||||| | ||||||||| ||||| || |||||||| || || ||||| | Sbjct 974220 AGTCGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGA 974161 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || || ||||||||||| || |||||||| || ||||| ||||| || || | || ||| Sbjct 974160 CCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCC 974101 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| ||| || || ||||| ||||||||| || ||||| || ||| Sbjct 974100 TTGTCCTGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTG 974041 Query 211077 ATCGTCTTTCCCGTGAGA 211094 || || || || |||||| Sbjct 974040 ATGGTTTTGCCGGTGAGA 974023 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || |||| || |||||||| ||||| ||||| || |||||||| || || | | ||| Sbjct 973942 CGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTT 973883 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||| || ||||| || || |||||||| || ||||| |||||||| |||| || Sbjct 973882 CGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGGGGAATGCCC 973823 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| || || || || |||||||| || || ||||| || Sbjct 973822 TCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAGG 973763 Query 211074 GTGATCGTCTTTCCCGT 211090 ||||| |||||||| || Sbjct 973762 GTGATGGTCTTTCCTGT 973746 Score = 140 bits (154), Expect = 8e-28 Identities = 137/177 (77%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| ||| || || || || |||||||| || || |||||||| || || || ||| Sbjct 973328 TAGTCCGAAAGAGTTCTGCCGTCCTCCAGCTGTTTACCGGCGAAGATGAGTCGCTGCTGG 973269 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 ||||| |||| ||| ||||||||||||||||| ||||| || ||||| ||||| || Sbjct 973268 TCAGGTGGAATTCCCTCCTTGTCCTGGATCTTGCTCTTCACATTGTCGATAGTGTCCGAA 973209 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || ||||| | ||| ||||||||||| || || ||||| || || | ||||||| Sbjct 973208 GACTCGACCTCCAAAGTAATCGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCATT 973152 Score = 132 bits (146), Expect = 1e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| ||||| | || |||||||||||||| || |||||||| | || || ||| Sbjct 973050 TAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG 972991 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 |||||||| | || ||||||||||||||||| || || || ||||| ||||| || Sbjct 972990 TCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCCGAA 972931 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || || ||||| ||||| ||||| | |||||| Sbjct 972930 GACTCGACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 972875 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || || | |||||| | ||||| || |||||||| || || |||||||| || || ||| Sbjct 972767 TAGTCAGAAAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGTCGCTGCTGG 972708 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || ||||| | || ||||||||||| ||||| || ||||| ||||| ||||| || Sbjct 972707 TCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAA 972648 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || ||||| || ||||| |||||||| || Sbjct 972647 GACTCGACCTCAAGGGTGATTGTCTTTCCGGT 972616 >seq1 Length=8012737 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || || | || || | ||||| Sbjct 2303478 AGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCATCC 2303537 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || |||||||| || || || |||||||| || | || ||||||||| Sbjct 2303538 TCGAGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 2303597 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||| || Sbjct 2303598 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTT 2303657 Query 211083 TTTCCCGTGAG 211093 || |||||||| Sbjct 2303658 TTGCCCGTGAG 2303668 Score = 122 bits (134), Expect = 2e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 ||||| |||| ||| || || |||||||| || || || |||||||| |||| || ||| Sbjct 963598 CCATCCTCCAACTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGAATACCCTCC 963539 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| || ||||| ||||| ||||| ||| || |||||||| ||| Sbjct 963538 TTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTG 963479 Query 211077 ATCGTCTTTCCCGTGAG 211093 || ||||| |||||||| Sbjct 963478 ATGGTCTTACCCGTGAG 963462 Score = 104 bits (114), Expect = 5e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 139806 CCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAA 139865 |||||| ||||||||||| |||| || ||||||||||||||||| | || ||| | Sbjct 6084462 CCTTCCCAAGAAGCACGGTCGAGGTGGTCAATCTGCTCTGCGTTTCTCCCGTCTGCGAGA 6084403 Query 139866 GGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAA 139925 |||| ||||| ||||| || ||||||| || ||| ||| | ||| ||| |||| Sbjct 6084402 GGAAGCGAGGCGAAACTATGTGCGAAAAGTCGCCGAGCTGGCAGTCCAGCATTTCATCAC 6084343 Query 139926 AGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAA 139985 || ||||| |||| ||||| | || ||||| ||| |||||| ||||||| | Sbjct 6084342 CAACGACAAGGTCAATGTTGCTGGTCTGGTGTTGGCCGGTAGTGCAGAGCTCAAGACCGA 6084283 Query 139986 GCT-CCTGGAATCTGACTTTTTTGACCCGAGGCT 140018 | ||||| |||||| || ||||| || || Sbjct 6084282 CTTGAGTGGAA-GTGACTTGTTCGACCCCAGACT 6084250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151881186920