Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7 154 4e-32 seq1 132 1e-25 >seq7 Length=1004146 Score = 154 bits (170), Expect = 4e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || |||| || |||||||||||||| || || || |||| ||||| |||| ||| ||| Sbjct 973942 CGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAAGGTT 973883 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || ||||||||||| |||||||| ||||| || ||||| || Sbjct 973882 CGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGGGGAATGCCC 973823 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| ||| || |||||||| || | ||||| || | Sbjct 973822 TCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAGG 973763 Query 225673 GTGATCGTCTTGCCCGTCAA 225692 ||||| ||||| || ||||| Sbjct 973762 GTGATGGTCTTTCCTGTCAA 973743 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 |||| ||||| | ||| ||||| || || || |||| ||||| ||| || |||| Sbjct 974220 AGTCGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGA 974161 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| ||||||||||| || ||||| |||||||| || ||||| ||| Sbjct 974160 CCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCGGGTGGGATACCCTCC 974101 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| || ||| ||||| ||||| |||| || || || | |||| Sbjct 974100 TTGTCCTGGATCTTCGATTTGACATTGTCGATCGTGTCAGAGGACTCGACCTCCAGCGTG 974041 Query 225676 ATCGTCTTGCCCGT 225689 || || ||||| || Sbjct 974040 ATGGTTTTGCCGGT 974027 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| | || || || || |||| ||||| |||| || |||| Sbjct 973660 CGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTT 973601 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || || || || ||||| || || |||||||| ||||| || ||||| || || || || Sbjct 973600 CTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGTATGCCC 973541 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| || ||||||||||| || | ||| || || | | Sbjct 973540 TCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGACCTCGAGC 973481 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||||||||| || || | || || | ||| | |||||| Sbjct 973480 GTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCATT 973439 Score = 100 bits (110), Expect = 7e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 225550 GTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATA 225609 |||| ||||| || |||||||| || || ||||||||||| || |||||||| || ||| Sbjct 972755 GTTCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGTCGCTGCTGGTCGGGAGGGATA 972696 Query 225610 CCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCT 225669 || |||||||| || ||||| ||| || ||||| ||||| || | || || || Sbjct 972695 CCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCGACCTCA 972636 Query 225670 AACGTGATCGTCTTGCCCGTCAA 225692 | ||||| ||||| || ||||| Sbjct 972635 AGGGTGATTGTCTTTCCGGTCAA 972613 >seq1 Length=8012737 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| |||| || ||||| ||||| Sbjct 2303478 AGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGACCATCC 2303537 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || || |||||||| ||||| || ||||| || || ||||| |||||||| Sbjct 2303538 TCGAGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCC 2303597 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | || || || | ||||| || Sbjct 2303598 TGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTT 2303657 Query 225682 TTGCCCGT 225689 |||||||| Sbjct 2303658 TTGCCCGT 2303665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531077765552