Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3 138 8e-28 >seq3 Length=2284511 Score = 138 bits (152), Expect = 8e-28 Identities = 243/348 (70%), Gaps = 6/348 (2%) Strand=Plus/Minus Query 27380 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 27439 |||| |||||||| |||| | || || | || || ||||||||| |||| || Sbjct 1792834 CTTTCGGGTTCCATGCGCTAAGGACTATTCTCCGATCCGTGGGGTTGTTCTTGATCTTGT 1792775 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTG 27498 | | | | | ||| | ||||| || || | || ||||| || | || |||| | Sbjct 1792774 CAATGACCTCTTGTAATTGATCTACTCCTTTTCCATGGTAGTTGTCCTCGCAAGTCCC-G 1792716 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 ||||||||||| || |||||||||||||| || ||||||||||| ||||| || || || Sbjct 1792715 TACTCTGCTCCAAAGTGCCTCCATTGGAATCCATACACCGGTCCAAGGTCACCTTC--CC 1792658 Query 27559 CTGTGCTCGA-AGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCT 27616 | || || |||||| | |||||||| | ||||| || || || | |||||||| | Sbjct 1792657 GTCTGTGAGATAGCCCCACTTTGTCCAAGTACTCTCTCGAGCCATTCCCTTCCCAGATAT 1792598 Query 27617 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCT 27676 | || ||||||||| | | ||| || ||| | || ||||| ||||| ||||||| Sbjct 1792597 TCACGCCCTTCTCGCTCAATTTCTTGCCGTCGGTGCAGCCGCTGACAAACCATAGCAGCT 1792538 Query 27677 CCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724 | || | ||| || || || | |||||| ||||| || |||| Sbjct 1792537 CTTCGATGACACCCCGTGTGAATACTCGCTTGGTAGTGAGTAGAGGAA 1792490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507163973048