Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq7 174 3e-38 seq1 143 6e-29 >seq7 Length=1004146 Score = 174 bits (192), Expect = 3e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || || ||||| || || || || || |||||||||||||| | Sbjct 973667 ACCACCTCGCAGACGCAGAACCAGGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGA 973608 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||| ||||| || ||||| ||||| ||||| | || || |||||| || Sbjct 973607 CAGAGTTCTGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGTCGCTGCTGGTCAGGTGG 973548 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| || ||||| ||| || ||| | ||||| |||||||||| ||||| Sbjct 973547 TATGCCCTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCCGAAGATTCGA 973489 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | ||||| ||||||||||| || || | ||||| ||||| ||||||||| Sbjct 973488 CCTCGAGCGTGATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCATT 973439 Score = 141 bits (156), Expect = 2e-28 Identities = 141/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| || | ||| ||||| || ||||| ||||| ||||| | || || | Sbjct 973330 TGTAGTCCGAAAGAGTTCTGCCGTCCTCCAGCTGTTTACCGGCGAAGATGAGTCGCTGCT 973271 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCC 283040 ||||| ||||| ||||||||||| |||||||| ||| || || | |||||||||||| Sbjct 973270 GGTCAGGTGGAATTCCCTCCTTGTCCTGGATCTT-GCTCTTCACATTGTCGATAGTGTCC 973212 Query 283041 GAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||| ||||| || | ||| |||||||| || || | ||||| ||||| ||||||||| Sbjct 973211 GAAGACTCGACCTCCAAAGTAATCGTCTTTCCAGTAAGGGTCTTGACGAAGATCTGCATT 973152 Score = 132 bits (146), Expect = 1e-25 Identities = 136/178 (76%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | || || ||||| || || || || || ||||| |||||||| || || | Sbjct 973052 TGTAGTCCGAGAGGGTTCGGCCGTCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCT 972993 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 ||||| || |||||||||||||| |||||||| | || || | ||||| ||||||| Sbjct 972992 GGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATTGTGTCCG 972933 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| ||||| ||||| ||||| || || || || | ||||| || || |||||||| Sbjct 972932 AAGACTCGACCTCGAGGGTGATGGTTTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 972875 Score = 131 bits (144), Expect = 4e-25 Identities = 123/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||||| ||| || ||||||||||| || || || ||||||||||| | || || | Sbjct 972769 TGTAGTCAGAAAGGGTTCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATAAGTCGCTGCT 972710 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || |||||||||||||| || ||||| | || ||| | ||||||||||| | Sbjct 972709 GGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCGG 972650 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAA 283078 ||| ||||| || || ||||| ||||| || ||||| Sbjct 972649 AAGACTCGACCTCAAGGGTGATTGTCTTTCCGGTCAA 972613 Score = 129 bits (142), Expect = 1e-24 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 |||||| || || || || || || || | || || || |||||||||||||| | Sbjct 973949 ACCACCTCGGAGTCGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 973890 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || || |||||||| || ||||| || || ||||||| ||||| |||||| | Sbjct 973889 CAAG-GTTCGTCCATCCTCAAGCTGTTTACCAGCGAAGATCAGTCGTTGCTGGTCAGGGG 973831 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| ||||||||||| || ||||| | || || | || || |||||||||| || | Sbjct 973830 GAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCCGAAGACTCCA 973771 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAA 283078 | || || ||||| ||||| || ||||| Sbjct 973770 CCTCCAGGGTGATGGTCTTTCCTGTCAA 973743 Score = 107 bits (118), Expect = 4e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||| || || || || ||||| || || || || || ||| Sbjct 974193 TCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGACCGTCCTCCAGCTGCTTTCCAGCGAAG 974134 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | |||||| ||||| || |||||||||||||| |||||||| | ||| || | Sbjct 974133 ATGAGACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTCGATTTGACATTG 974074 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| || | ||||| || || ||||| || || || || Sbjct 974073 TCGATCGTGTCAGAGGACTCGACCTCCAGCGTGATGGTTTTGCCGGT 974027 >seq1 Length=8012737 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || ||||| || || || | || || || |||||||||||||| | Sbjct 2303462 ACCACCTCTCAATCGAAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 2303521 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| |||||||| ||||| ||||| | || || |||||| || Sbjct 2303522 CAGAGTTCGACCATCCTCGAGTTGTTTACCGGCGAAGATGAGTCGCTGCTGGTCAGGTGG 2303581 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | ||||| |||||||||| ||||| Sbjct 2303582 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGAC 2303641 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| || || ||||| Sbjct 2303642 CTCAAGGGTGATGGTTTTGCCCGT 2303665 Score = 129 bits (142), Expect = 1e-24 Identities = 121/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| || || ||||||||||| | ||||| ||||| ||||| | || || | Sbjct 963618 TGTAGTCGCTGAGAGTTCGGCCATCCTCCAACTGTTTACCGGCGAAGATGAGTCGCTGCT 963559 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 ||||| ||||||||||||||||| |||||||| | || ||| | ||||| ||||||| Sbjct 963558 GGTCAGGTGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCG 963499 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | | ||||| ||||| ||||| ||||||||||| Sbjct 963498 AGGACTCGACCTCGAGGGTGATGGTCTTACCCGT 963465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739092709232