Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bullera_20alba_20[genbank_20GCA_5F001600095.1_202016-03-01] 8 sequences; 19,417,308 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 176 1e-38 seq1 150 4e-31 >seq7 Length=1004146 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| |||||||| |||||||| ||| || ||| Sbjct 973443 CAGATCTTCGTCAAGACGCTCACCGGAAAGACGATCACGCTCGAGGTCGAATCTTCGGAC 973502 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || || || || |||||||| Sbjct 973503 ACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGCATACCACCTGACCAGCAG 973562 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||||||||| ||||||||||| || || || ||||| |||| || ||| || Sbjct 973563 CGACTCATCTTCGCCGGCAAACAGCTCGAGGACGGCAGAACTCTGTCCGACTACAACATC 973622 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || |||| || ||| || Sbjct 973623 CAGAAGGAGTCGACCTTGCACCTGGTTCTG 973652 Score = 154 bits (170), Expect = 4e-32 Identities = 155/199 (78%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 |||||||| || |||||||| |||||||| || |||||||| || || ||||| Sbjct 973746 ACAGGAAAGACCATCACCCTGGAGGTGGAGTCTTCGGACACCATTGACAATGTCAAGTCG 973805 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || || || || |||||||||||||| |||||||| || ||| Sbjct 973806 AAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAACGACTGATCTTCGCTGGTAAA 973865 Query 178065 CAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 ||||| || |||||| | || |||| |||| || ||| |||| || || || || || || Sbjct 973866 CAGCTTGAGGATGGACGAAC-CTTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 973924 Query 178124 TCTTGTTTTGAGACTCAGA 178142 |||||| | ||||| || Sbjct 973925 CCTTGTTCTCCGACTCCGA 973943 Score = 131 bits (144), Expect = 4e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| || |||||||| ||||| || || ||||| ||||| |||||||| Sbjct 972616 ACCGGAAAGACAATCACCCTTGAGGTCGAGTCTTCCGACACTATCGACAACGTCAAGTCC 972675 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || |||||||| |||||||| ||||||||||| |||||||| Sbjct 972676 AAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAGCGACTTATCTTTGCCGGAAAG 972735 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 ||||| || ||||| | || ||| | || || Sbjct 972736 CAGCTTGAGGATGGCCGAACCCTTTCTGACTA 972767 Score = 131 bits (144), Expect = 4e-25 Identities = 122/155 (79%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || ||||| |||||||||||||| || || ||| Sbjct 972878 CAGATCTTTGTCAAGACCCTCACTGGCAAAACCATCACCCTCGAGGTCGAGTCTTCGGAC 972937 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 972938 ACAATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAG 972997 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 ||| | |||||||||||||| ||||| ||||| || Sbjct 972998 CGATTGATCTTCGCCGGAAAGCAGCTGGAAGACGG 973032 Score = 131 bits (144), Expect = 4e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000 |||||| || ||||| ||||| || ||||| || ||| ||||| ||||| || ||||| Sbjct 974023 TCTCACCGGCAAAACCATCACGCTGGAGGTCGAGTCCTCTGACACGATCGACAATGTCAA 974082 Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060 | ||||| |||||||| || || ||||| || ||||||||||| || |||||||| || Sbjct 974083 ATCGAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAACGTCTCATCTTCGCTGG 974142 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACT 178120 ||| ||||| || || || | || || ||| || ||| |||| || || || || || Sbjct 974143 AAAGCAGCTGGAGGACGGTCGAACCCTGAGCGACTACAACATCCAGAAGGAGTCGACTCT 974202 Query 178121 GCATCTTGTTTTGAGACTCAGA 178142 || | || | |||||||| Sbjct 974203 TCACTTGGTCCTCCGACTCAGA 974224 Score = 118 bits (130), Expect = 3e-21 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || ||||| ||||| || | ||||| || || ||| Sbjct 973156 CAGATCTTCGTCAAGACCCTTACTGGAAAGACGATTACTTTGGAGGTCGAGTCTTCGGAC 973215 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || ||||| || || |||||||| Sbjct 973216 ACTATCGACAATGTGAAGAGCAAGATCCAGGACAAGGAGGGAATTCCACCTGACCAGCAG 973275 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 ||||| ||||||||||| |||||||| || || || || |||||| | || || Sbjct 973276 CGACTCATCTTCGCCGGTAAACAGCTGGAGGACGGCAGAACTCTTTCGGACTA 973328 >seq1 Length=8012737 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || ||||| |||||||| ||||| || || ||||||||||| |||||||| Sbjct 2303668 CTCACGGGCAAAACCATCACCCTTGAGGTCGAGTCTTCGGACACCATCGACAACGTCAAG 2303609 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| Sbjct 2303608 TCCAAGATCCAGGACAAGGAGGGTATCCCACCTGACCAGCAGCGACTCATCTTCGCCGGT 2303549 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 ||||| ||||| ||||| | ||||| |||| || ||| |||| || || || || || Sbjct 2303548 AAACAACTCGAGGATGGTCGAACTCTGTCCGACTACAACATCCAGAAGGAGTCTACCCTC 2303489 Query 178122 CATCTTGT 178129 || || || Sbjct 2303488 CACCTCGT 2303481 Score = 123 bits (136), Expect = 6e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || |||||||||||||| || ||| ||||| ||||| |||||||| Sbjct 963462 CTCACGGGTAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATCGACAACGTCAAG 963521 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || || || || |||||||| ||||| ||||||||||| Sbjct 963522 TCCAAGATCCAGGACAAGGAGGGTATTCCACCTGACCAGCAGCGACTCATCTTCGCCGGT 963581 Query 178062 AAACAGCTCGAAGATGGAAGGACTCT 178087 |||||| | || ||||| | ||||| Sbjct 963582 AAACAGTTGGAGGATGGCCGAACTCT 963607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731076617552