Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq221 89.7 4e-13 >seq221 Length=819827 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18122 GTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTG 18181 ||| || || ||||| || |||||||||||||| | || || | | ||| |||| || Sbjct 382173 GTGGAGAGTGGATTCCTTCTGAATGTTGTAGTCCGACAGGGTCCTTCCATCCTCCAGCTG 382114 Query 18182 TTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTG 18241 ||||||||| |||| | |||||||||||| || | || ||||| || || | Sbjct 382113 CTTGCCCGCAAAGATCAATCTTTGTTGATCGGGAGGAATACCCTCCTTGTCCTGGATCTT 382054 Query 18242 TTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 |||||| | | | |||||| | |||| || | |||||| | ||||| || Sbjct 382053 GGCCTTGACATTGTCGATAGTGTCCGAGCTCTCGACCTCCAGCGTGATGGTCTTGCCAGT 381994 Query 18302 CAATGTTTTTACAAAAATTTGCAT 18325 ||| || || ||||| |||||||| Sbjct 381993 CAAGGTCTTCACAAAGATTTGCAT 381970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341757721325