Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq233 82.4 6e-11 >seq233 Length=223772 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| |||||| | ||||| || ||||| || | || || || ||| Sbjct 211473 ATGCAGATCTTTGTCAAAACCCTCACCGGAAAGACGATCACTTTGGAGGTAGAGAGTAGC 211414 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | || | || |||| ||| || | ||||||||| | || ||| ||| Sbjct 211413 GATACCATTGACAACGTCAAGGCAAAGATCCAAGACAAAGAAGGCATTCCTCCTGATCAG 211354 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||| | || | ||| ||||||||||| ||||| || | ||| |||| | Sbjct 211353 CAACGCCTCATTTTTGCTGGCAAACAACTCGAAGACGGTCGCACCCTTTCCGACTACAAC 211294 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||| ||| ||||||||| || ||| | || | || || ||| Sbjct 211293 ATTCAGAAGGAGAGCACGCTTCACTTGGTGCTTCGTCTCCGTGGTGGT 211246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418301527431200