Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceraceosorus_20bombacis_20[genbank_20GCA_5F900000165.1_202015-10-18] 485 sequences; 26,090,089 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq233 86.0 2e-11 >seq233 Length=223772 Score = 86.0 bits (94), Expect = 2e-11 Identities = 150/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACG---TTCATTCGCGGAA 22491 ||| | ||||| || ||||| || | ||||| | | ||| ||| ||| | || Sbjct 43434 AAGCAAAAGGCTGACTGGGCACTCAGGTGGATCTCCGACAGACGATCTTCCTTCTCCGAG 43375 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551 | || || || ||||| | || || ||||| ||||| || ||| | ||| | | ||| Sbjct 43374 AGACTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGATCTTTTGCTTCCATC 43315 Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611 |||||||| || || | | | |||||||| || | || || |||||| | || | Sbjct 43314 TTTTGGCTCAAGAAGAGGGGTCTGATGCCGGGACTGAGCTTCTCCAATGAGCTCATCTCC 43255 Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 ||||| || |||||||| ||||| ||||| || |||| Sbjct 43254 CGAGACGAAGGTCTTCACACCGACTTTGCCTGCCTGCT 43217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345500879270